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Natural Environment Research Council Designated Data Centres

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  • To reconstruct the maternal demographic history of the populations of the Andaman and Nicobar archipelagos using genetic profiles obtained from colonial era skeletal material and hair collections. The project had two main technical arms: to obtain authentic DNA data from well-handled museum collections of human material, which were a priori presumed to be heavily contaminated; to use the data to fill in lacuna in the genetic landscape left by large-scale demographic decline caused by disease and social disruption associated with the modern era. The major aim of the interpretative phase of the project was to obtain realistic estimates for the date of settlement of these island groups based on genetics because of the absence of reliable archaeological evidence. The main aim of this research was to determine whether the Andaman islanders were part of a very early radiation from Africa or arrived to their archipelago much later. The Nicobars were included in the research to have a comparative data set from the same region from people with a different phenotype. The data set is comprised of mitochondrial DNA control region sequences and coding region Single Nucleotide Polymorphisms.

  • The project aim was to develop process-based computer simulations of the dispersal of Homo erectus out of Africa. This involved developing realistic constraints on the patterns of vegetation and the effects of changes in global sea level. It was assumed that this migration out of Africa could be investigated through the paradigm of a single migration event, starting around 2 millions of years ago and arriving in Dmanisi around 1.8 millions of years ago. The data archived here consists of the vegetation patterns used in constructing the simulations and the patterns of climate variability used to constrain the variations in sea level and vegetation change. From these data it is possible to reproduce the simulation results. Simulation results are available from J.K. Hughes, A. Haywood, S.J. Mithen, B.W. Sellwood, P.J. Valdes (In Press) Investigating Early Hominin Dispersal Patterns : developing a framework for climate data integration. Journal Of Human Evolution.

  • This research sought to explore the pattern of population movement (direction, rate, permanency) along a hypothesised route from Africa to Australasia during Oxygen Isotope Stage 4. Using GIS-based analyses and hypothetical models of population movement, potential routes out of East Africa were generated and examined. The goal of these analyses was to assess the viability of particular routes, and consider them in terms of ecological and geographical constraints. As a result, several routes through Africa, Arabia, South Asia, Southeast Asia, and Australasia were proposed and evaluated. These routes have been further examined with regards to archaeological site location, the timing of human presence in South Asia, and biological indicators of human diversity.

  • The spectacular botanical preservation and long occupation of Qasr Ibrim, Egypt make this site archaeobotanically matchless. 600 samples have been collected over 20 years covering a timespan of c. 1000 BC - AD 1800. The project has particularly focussed on the period AD 100-400 during which several new summer crops including sorghum, cotton, lablab and sesame first appear. These new crops are thought to be associated with the introduction of new irrigation technology, specifically a device known as the saqia, an ox-driven water wheel from which descends a conveyor belt to which pots are attached. It has never before been possible to examine this crucial change archaeologically and this project has allowed the investigation of when and how this great change happened. This has major implications for the history of agriculture in Africa and the Indian Ocean.

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    This dataset is comprised of CTD temperature, salinity and potential temperature collected using seal tags. Data were collected as part of the NERC-funded project 'Ocean processes over the southern Weddell Sea shelf using seal tags'. Data were not collected as part of a cruise as seals were used as data activity platforms. 20 Weddell seals were tagged at the eastern end of the shelf-break north of the Filchner-Ronne Ice Shelf between 11 February 2011 and 03 May 2011. The aims of the project were: 1. The resulting data from the seals’ dives will provide the most comprehensive picture to date of the ocean conditions over the southern Weddell Sea continental shelf. 2. By mapping the temperature of the water near the sea floor it will be possible to determine the locations where dense waters leave the shelf, and the processes involved: either a direct flow down the slope under gravity, or initially mixing at the shelf edge with waters from off the shelf before descending down the slope. 3. To determine where the source waters come onto the shelf. 4. Though the research was primarily oceanographic, the movements and diving behaviour provide insight to seal biologists studying the animals' beahviour. Data were collected as part of NERC standard grants NE/G014086/1 and NE/G014833/1. NE/G014086/1 was the lead grant and was led by Dr Keith William Nicholls of NERC British Antarctic Survey, Science Programmes and runs from 01 April 2010 to 31 December 2018. The secondary grant, NE/G014833/1, was led by Professor Michael Fedak of University of St Andrews, Sea Mammal Research Unit and runs from 01 October 2010 to 28 February 2014. The seal tag CTD data have been received by BODC and are currently available in original format upon request.

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    The data set comprises time series of sea level data from coastal tide gauges. The data holdings include over 1000 site years of data from about 200 sites comprising about 10 million records. About 75 per cent of the data are from some 100 sites around the British Isles - the remaining data are from coastal sites and islands scattered across the globe. Data are primarily hourly values. Recording periods vary from one month at some sites to over several years.There are three short series from around the Irish coast which were collected in 1842.

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    This dataset contains high and low water values manually digitised from historic hand-written tabulated ledgers, from the Port of London Authority (PLA). The dataset contains 463 years of data, from across 15 tide gauge sites along the Thames Estuary (bounding box = -0.3159W, 51.3914N, 1.3797E, 51.8428N), for the period 1911 to 1995. When these historic records are combined with digital records available from the PLA since 1995, the new sea level time-series spans the 109-year period from 1911 to 2019. London is one of the world’s most important coastal cities and is located around the Thames Estuary. Quantifying changes in sea levels in the Thames Estuary over the 20th century and early part of the 21st century is vital to inform future management of flood risk in London. This dataset is of importance for ongoing monitoring of mean sea-level rise, and changes in tidal range and extreme sea levels in the Thames Estuary. The project was led by the Ocean and Earth Science, University of Southampton and the Environment Agency, with contributions from the Leibniz Institute for Baltic Sea Research Warnemunde and the National Oceanography Centre. The study contributes to the objectives of UK National Environment Research Council (NERC) project E-Rise: Earliest detection of sea-level rise accelerations to inform lead time to upgrade/replace coastal flood defence infrastructure (NE/P009069/1; I.D.H.).

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    A collection of raw water temperature-depth-time profiles were recorded from a selection of dive computers, underwater cameras and baseline Castaway microCTD devices. Data were collected at Oban recompression chamber (owned and managed by Tritonia Scientific), as well as during sea dives local to 56.42 N, 5.47W, over a two-week period between 08/01/2020 and 07/02/2020. A number of different devices and models were tested during the study. Chamber dives were undertaken to test and compare device response time (29 devices over 11 dives) and accuracy (6 replicate dives). This was followed by local sea dives to further compare device accuracy. During each pair of sea dives (6 total), half of the devices were mounted on a frame with the remainder worn by two divers. For the subsequent dives in each pair, each device was switched to the alternate mounting position. Dive profiles were exported from individual dive computers into Subsurface open source software, then exported in ssrf (XML) format for each week of data collection. Profiles from all dive computers were combined for analysis. Castaway microCTDs and Paralenz Dive Camera+ profiles were exported as individual CSV files per dive. Data were collected as part of Celia Marlowe’s PhD project at the University of East Anglia, which aimed to assess the precision, accuracy and uncertainty in water temperature profiles collected from devices commonly carried by Scuba divers. The PhD project is part of the Next Generation Unmanned Systems Science (NEXUSS) Centre for Doctoral Training, funded by the Natural Environment Research Council (NERC) and the Engineering and Physical Science Research Council (EPSRC) (NE/N012070/1), and is additionally supported by Cefas Seedcorn (DP901D). The diving and chamber tests were supported through a NERC National Facility for Scientific Diving grant (NFSD/17/02).

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    For around a decade, southern elephant seals (mirounga leonina) have been used to collect hydrographic (temperature & salinity) profiles in the Southern Ocean. CTD-SRDLs (Conductivity Temperature Depth –Satellite Relayed Data Loggers) attached to seals' heads in Antarctic and sub-Antarctic locations measure water property profiles during dives and transmit data using the ARGOS (Advanced Research & Global Observation Satellite) network (Fedak 2013). CTD-SRDLs are built by the Sea Mammal Research Unit (SMRU, University of St Andrews, UK); they include miniaturised CTD units made by Valeport Ltd. When seals are foraging at sea 2.5 profiles can be obtained daily, on average. Profiles average 500m depth, but can be 2000m in extreme cases (Boehme et al. 2009, Roquet et al. 2011). Deployment efforts have been very intensive in the Southern Indian Ocean, with biannual campaigns in the Kerguelen Islands since 2004 and many deployments in Davis and Casey Antarctic stations (Roquet et al., 2013) more recently. 207 CTD-SRDL tags have been deployed there, giving about 75,000 hydrographic profiles in the Kerguelen Plateau area. About two thirds of the dataset was obtained between 2011 & 2013 as a consequence of intensive Australian Antarctic station deployments. There is also regular data since 2004 from French and Franco-Australian Kerguelen Island deployments. Although not included here, many CTD-SRDL tags deployed in the Kerguelen Islands included a fluorimeter. Fluorescence profiles can be used as a proxy for chlorophyll content (Guinet et al. 2013, Blain et al. 2013). Seal-derived hydrographic data have been used successfully to improve understanding of elephant seal foraging strategies and their success (Biuw et al., 2007, Bailleul, 2007). They provide detailed hydrographic observations in places and seasons with virtually no other data sources (Roquet et al. 2009, Ohshima et al. 2013, Roquet et al. 2013). Hydrographic data available in this dataset were edited using an Argo-inspired procedure and then visually. Each CTD-SRDL dataset was adjusted using several delayed-mode techniques, including a temperature offset correction and a linear-in-pressure salinity correction - described in Roquet et al. (2011). Adjusted hydrographic data have estimated accuracies of about +/-0.03oC and +/-0.05 psu (practical salinity unit). The salinity accuracy depends largely on the distribution of CTD data for any given CTD-SRDL, which decides the quality of adjustment parameters. Adjustments are best when hydrographic profiles are available in the region between the Southern Antarctic Circumpolar Current Front and the Antarctic divergence (55oS-62oS latitude range in the Southern Indian Ocean). Several institutes provided funding for the associated programs and the logistics necessary for the fieldwork. The observatory MEMO (Mammifères Echantillonneurs du Milieu Marin), funded by CNRS institutes (INSU and INEE), carried out the French contribution to the study. The project received financial and logistical support from CNES (TOSCA program), the Institut Paul-Emile Victor (IPEV), the Total Foundation and ANR. MEMO is associated with the Coriolis centre, part of the SOERE consortium CTD02 (Coriolis-temps différé Observations Océaniques, PI: G. Reverdin), which distributes real-time and delayed-mode products. The Australian contribution came from the Australian Animal Tracking and Monitoring System, an Integrated Marine Observing System (IMOS) facility. The work was also supported by the Australian Government's Cooperative Research Centres Programme via the Antarctic Climate & Ecosystem Cooperative Research Centre. The University of Tasmania and Macquarie University's Animal Ethics Committees approved the animal handling. Both tagging programs are part of the MEOP (Marine Mammals Exploring the Oceans Pole to Pole) international consortium - an International Polar Year (IPY) project.

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    This database, and the accompanying website called ‘SurgeWatch’ (http://surgewatch.stg.rlp.io), provides a systematic UK-wide record of high sea level and coastal flood events over the last 100 years (1915-2014). Derived using records from the National Tide Gauge Network, a dataset of exceedence probabilities from the Environment Agency and meteorological fields from the 20th Century Reanalysis, the database captures information of 96 storm events that generated the highest sea levels around the UK since 1915. For each event, the database contains information about: (1) the storm that generated that event; (2) the sea levels recorded around the UK during the event; and (3) the occurrence and severity of coastal flooding as consequence of the event. The data are presented to be easily assessable and understandable to a wide range of interested parties. The database contains 100 files; four CSV files and 96 PDF files. Two CSV files contain the meteorological and sea level data for each of the 96 events. A third file contains the list of the top 20 largest skew surges at each of the 40 study tide gauge site. In the file containing the sea level and skew surge data, the tide gauge sites are numbered 1 to 40. A fourth accompanying CSV file lists, for reference, the site name and location (longitude and latitude). A description of the parameters in each of the four CSV files is given in the table below. There are also 96 separate PDF files containing the event commentaries. For each event these contain a concise narrative of the meteorological and sea level conditions experienced during the event, and a succinct description of the evidence available in support of coastal flooding, with a brief account of the recorded consequences to people and property. In addition, these contain graphical representation of the storm track and mean sea level pressure and wind fields at the time of maximum high water, the return period and skew surge magnitudes at sites around the UK, and a table of the date and time, offset return period, water level, predicted tide and skew surge for each site where the 1 in 5 year threshold was reached or exceeded for each event. A detailed description of how the database was created is given in Haigh et al. (2015). Coastal flooding caused by extreme sea levels can be devastating, with long-lasting and diverse consequences. The UK has a long history of severe coastal flooding. The recent 2013-14 winter in particular, produced a sequence of some of the worst coastal flooding the UK has experienced in the last 100 years. At present 2.5 million properties and £150 billion of assets are potentially exposed to coastal flooding. Yet despite these concerns, there is no formal, national framework in the UK to record flood severity and consequences and thus benefit an understanding of coastal flooding mechanisms and consequences. Without a systematic record of flood events, assessment of coastal flooding around the UK coast is limited. The database was created at the School of Ocean and Earth Science, National Oceanography Centre, University of Southampton with help from the Faculty of Engineering and the Environment, University of Southampton, the National Oceanography Centre and the British Oceanographic Data Centre. Collation of the database and the development of the website was funded through a Natural Environment Research Council (NERC) impact acceleration grant. The database contributes to the objectives of UK Engineering and Physical Sciences Research Council (EPSRC) consortium project FLOOD Memory (EP/K013513/1).