2013
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This is a long-term monitoring dataset of surface temperature, surface oxygen, water clarity, water chemistry and phytoplankton chlorophyll a from weekly to fortnightly sampling at Grasmere in Cumbria, England that began in 1968 for some variables. The data were initially collected by the Freshwater Biological Association but have been collected by the Centre for Ecology & Hydrology (CEH) and its predecessor Institute of Freshwater Ecology since 1989. The data available to download comprise surface temperature (TEMP) in degree Celsius, surface oxygen saturation (OXYG) in % air-saturation, Secchi depth (SECC) in metres, alkalinity (ALKA) in µg per litre as CaCO3 and pH. Ammonium (NH4N), nitrate (NO3N), soluble reactive phosphate (PO4P), total phosphorus (TOTP), dissolved reactive silicon expressed as SiO2 (SIO2) and phytoplankton chlorophyll a (TOCA) are all given in µg per litre. Measurements are made from a boat at a marked location (buoy) at the deepest part of the lake. When it was not possible to visit the buoy, samples were taken from the shore, thus water samples were not integrated on these occasions, marked as Flag 2. All data are from June 1968 until the end of 2013. Full details about this dataset can be found at https://doi.org/10.5285/b891c50a-1f77-48b2-9c41-7cc0e8993c50
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The Normalised Difference Vegetation Index (NDVI) dataset details surface reflectance measured as NDVI. NDVI provides a proxy for the amount and/or the relative 'greenness' of vegetation. Data collection was carried out at six intertidal sites in the winter and summer of 2013. Three of the sites were in Morecambe Bay, North West England and three of the sites were in Essex, South East England, each of these sites consisted of a saltmarsh area and adjacent mudflat area, twenty two sampling quadrats were placed on each area. A single NDVI observation was taken at each quadrat. Spectral reflectance was measured using a portable spectrometer. This data was collected as part of Coastal Biodiversity and Ecosystem Service Sustainability (CBESS): NE/J015644/1. The project was funded with support from the Biodiversity and Ecosystem Service Sustainability (BESS) programme. BESS is a six-year programme (2011-2017) funded by the UK Natural Environment Research Council (NERC) and the Biotechnology and Biological Sciences Research Council (BBSRC) as part of the UK's Living with Environmental Change (LWEC) programme. Full details about this dataset can be found at https://doi.org/10.5285/75b1f669-66b3-472b-9d31-eda908826e17
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The dataset details macrofaunal abundance across 6 intertidal sites in the winter and summer of 2013. The data provide a quantitative measure of the invertebrate species present within the top 10cm of sediment. Three sites were located in Essex, South East England and the other 3 in Morecambe Bay, North West England. Each site consisted of a saltmarsh habitat and adjacent mudflat habitat. 22 sampling quadrats were placed in each habitat covering 4 spatial scales. 3 replicate cores of sediment were collected at each quadrat. They were sieved on a 0.5mm mesh and the macrofauna was removed, identified to species (or appropriate taxon) and individuals counted. Values for macrofaunal abundance are expressed as number of individuals per square metre of sediment. Abundance data for mudflat habitats across Essex and Morecambe are complete, however, saltmarsh data is only available for one full Essex site (Tillingham Marsh), in one season (winter) and across all sites, but only at the 1m scale. This data was collected as part of Coastal Biodiversity and Ecosystem Service Sustainability (CBESS): NE/J015644/1. The project was funded with support from the Biodiversity and Ecosystem Service Sustainability (BESS) programme. BESS is a six-year programme (2011-2017) funded by the UK Natural Environment Research Council (NERC) and the Biotechnology and Biological Sciences Research Council (BBSRC) as part of the UK's Living with Environmental Change (LWEC) programme. Full details about this dataset can be found at https://doi.org/10.5285/d5317679-449f-4829-9caf-39973fe27c07
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The dataset details greenhouse gas fluxes as carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) across six intertidal sites in the winter and summer of 2013. Three of the sites were in Morecambe Bay, North West England and three of the sites were in Essex, South East England, each of these sites consisted of a saltmarsh area and adjacent mudflat area, twenty two sampling quadrats were placed on each area. Light and dark incubations were performed using a benthic chamber on seven of the twenty two quadrats of each site. This data was collected as part of Coastal Biodiversity and Ecosystem Service Sustainability (CBESS): NE/J015644/1. The project was funded with support from the Biodiversity and Ecosystem Service Sustainability (BESS) programme. BESS is a six-year programme (2011-2017) funded by the UK Natural Environment Research Council (NERC) and the Biotechnology and Biological Sciences Research Council (BBSRC) as part of the UK's Living with Environmental Change (LWEC) programme. Full details about this dataset can be found at https://doi.org/10.5285/186fdb05-cc14-4315-be30-fec28048b310
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The dataset details surface sediment chlorophyll concentrations across six intertidal sites in the winter and summer of 2013. Chlorophyll concentrations in surface sediments (<2mm) provide a quantitative measure of the microphytobenthos (MPB) community present. Three of the sites were in Morecambe Bay, North West England and three of the sites were in Essex, South East England, each of these sites consisted of a saltmarsh area and adjacent mudflat area, twenty two sampling quadrats were placed on each area. Five replicate sediment samples were taken at each quadrat and then underwent acetone extraction of pigments followed by spectrophotometer analysis of absorptions at relevant wavelengths. Values for chlorophyll a, b and c1+ c2 are expressed as micrograms per gram of sediment. This data was collected as part of Coastal Biodiversity and Ecosystem Service Sustainability (CBESS): NE/J015644/1. The project was funded with support from the Biodiversity and Ecosystem Service Sustainability (BESS) programme. BESS is a six-year programme (2011-2017) funded by the UK Natural Environment Research Council (NERC) and the Biotechnology and Biological Sciences Research Council (BBSRC) as part of the UK's Living with Environmental Change (LWEC) programme. Full details about this dataset can be found at https://doi.org/10.5285/55bc4927-5d9b-4e64-b30e-f4f97c84b87c
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Data comprise body length (micrometres) of nematode (Caenorhabditis elegans) offspring from a laboratory study in which animals were exposed to control (0 copper) or copper dosed agar at different average temperatures (8 to 24 °C)) and under fluctuation conditions of low (plus or minus 4 °C) and high (plus or minus 8 °C) amplitude (average temperatures of 12, 16, 20 °C and 16 °C respectively) Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/af125e27-3b70-4f0a-81fb-a7eb10f64ef7
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These data are leaf litter decomposition rate in eight Welsh upland rivers with contrasting land-use, moorland and exotic conifer, in response to riparian deciduous leaf addition. Eight sampling reaches were chosen at two sites, Llyn Brianne (4 reaches) and Plynlimon (4 reaches). The experiment consisted of adding deciduous leaves to half of the reaches whilst the other half were maintained as a control (no addition of deciduous leaves). To characterise the leaf litter decomposition of the studied streams, onion bags were placed during November 2012, and then collected during January 2013 (before deciduous leaf addition) and March 2013 (after deciduous leaf addition) in each sampling reach. The main goal of this survey was to examine how aquatic biodiversity and litter decomposition respond to leaf addition in moorland and conifer forested rivers. Dr Isabelle Durance was responsible for organising the surveys, Dr Hugh Feeley, Dr Dan Perkins and Marian Pye were in charge of collecting, processing and sorting the samples. The work was carried out under Diversity in Upland Rivers for Ecosystem Service Sustainability (DURESS) project (Grant reference NERC NE/J014818/1). DURESS was a project funded by the Natural Environment Research Council (NERC) Biodiversity and Ecosystem Service Sustainability (BESS) programme. Full details about this dataset can be found at https://doi.org/10.5285/c121f915-6f64-4b74-aa24-cd70708a29d2
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These data provide results from serological analysis carried out on serum collected from cattle (sample number = 460), goats (sample number = 949) and sheep (Sample number = 574) combined with data collected at the household and subject/animal levels at the time of serum sampling. The data collected at the household and subject/animal levels were: the total number of livestock owned by a household, altitude, geographical coordinates of the sampling sites; and breed, age, sex and body condition score of an animal. The research was carried out in irrigated and non-irrigated areas in Tana River County, Kenya. Field surveys were implemented in August to November 2013 and laboratory analyses were completed in June 2015. Serum samples were harvested from blood samples obtained from animals and screened for anti-Rift Valley Fever (RVF) virus immunoglobulin G using inhibition (enzyme-linked immunosorbent assay) ELISA immunoassay. The household data was collected using Open Data Kit (ODK) loaded into smart phones. The serological analysis was performed to determine the risk of Rift Valley Fever virus exposure in cattle, sheep and goats. The aim of the survey was to investigate whether land use change, specifically the conversion of rangeland into cropland, affected RVF exposure pattern in livestock. The data were collected by experienced researchers from the Ministry of Livestock Development Nairobi, Kenya and the International Livestock Research Institute (Kenya). This dataset is part of a wider research project, the Dynamic Drivers of Disease in Africa Consortium (DDDAC). The research was funded by NERC project no NE-J001570-1 with support from the Ecosystem Services for Poverty Alleviation Programme (ESPA). Additional funding was provided by Consultative Group on International Agricultural Research (CGIAR) Research Program Agriculture for Nutrition and Health led by International Food Policy Research Institute (IFPRI). Full details about this dataset can be found at https://doi.org/10.5285/b9756c4c-9894-4147-a260-a79067604a06
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[THIS DATASET HAS BEEN WITHDRAWN]. This dataset comprises information of location and cytotype of over 1300 samples of Campanula rotundifolia L. from the northern hemisphere (mostly from Britain and Ireland) and data from a common garden study in which British and Irish cytotypes were grown together and their flowering phenology and growth were assessed. Campanula rotundifolia L. is a widespread polyploid perennial herbaceous plant, with diploid, tetraploid, pentaploid and hexaploid cytotypes. Full details about this dataset can be found at https://doi.org/10.5285/f27cf73b-65f0-4838-b6ad-efe865a4188c
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The resource consists of genotype data (genetic constitution of an individual organism) for three freshwater macroinvertebrate species, Amphinemura sulcicollis, Isoperla grammatica and Baetis rhodani collected at sites in upland Wales during May 2012 and May 2013. New nucleotide tandem repeats in DNA sequences i.e. Novel microsatellites were developed for this project so that genetic analysis could be carried out within the three species. Extra data on how microsatellite scores were grouped i.e. binned into unique alleles is provided, to aid replication. The data was generated for Hannah Macdonald's PhD thesis: to study genetic structure and diversity, demographic species history and resilience in freshwater ecosystems. The work was carried out under Diversity in Upland Rivers for Ecosystem Service Sustainability (DURESS) project (Grant reference NERC NE/J014818/1). DURESS was funded by the Natural Environment Research Council (NERC) under the Biodiversity and Ecosystem Service Sustainability (BESS) programme. Full details about this dataset can be found at https://doi.org/10.5285/27da4400-9835-4241-9df9-a3b598f8d274