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biota

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  • [THIS DATASET HAS BEEN WITHDRAWN]. Butterfly data from the UK Environmental Change Network (ECN) terrestrial sites. Counts of individual species are recorded. These data are collected while walking a defined transect at all of ECN's terrestrial sites using a standard protocol. They represent continuous weekly records from 1993 to 2012. ECN is the UK's long-term environmental monitoring programme. It is a multi-agency programme sponsored by a consortium of fourteen government departments and agencies. These organisations contribute to the programme through funding either site monitoring and/or network co-ordination activities. These organisations are: Agri-Food and Biosciences Institute, Biotechnology and Biological Sciences Research Council, Cyfoeth Naturiol Cymru - Natural Resources Wales, Defence Science & Technology Laboratory, Department for Environment, Food and Rural Affairs, Environment Agency, Forestry Commission, Llywodraeth Cymru - Welsh Government, Natural England, Natural Environment Research Council, Northern Ireland Environment Agency, Scottish Environment Protection Agency, Scottish Government and Scottish Natural Heritage. Full details about this dataset can be found at https://doi.org/10.5285/dad68dc4-9e36-457e-aa3a-e7eb816fb508

  • This dataset is in vitro validation of a potassium sensor that will be inserted into a plant stem. The dataset shows the sensitivity and selectivity of the fabricated potassium sensor. The data was obtained by measuring changes in electrical current with an increase in concentrations of the primary ion (K+) and interfering ion (Na+) to extract the sensitivity and selectivity, respectively using a semiconductor parameter analyser. K+ ion sensing data, measured directly inside a plant stem, are absent as the in vivo experiment should be optimised further. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/89998967-a974-4136-b650-b9af9f9d6969

  • [This dataset is embargoed until April 30, 2024]. This dataset contains information about temperature response curves of ACi (i.e., CO2 response curves of net photosynthesis) that were collected on Colombian Andean forests tree species that were planted in three, common-garden tree plantations along a 2000m altitudinal gradient. Specifically, individuals of cold- and warm-affiliated species were planted under common soil and water conditions, exposing them to the hot and cold extremes of their thermal niches, respectively. This work was supported by the UK Natural Environment Research Council (NE/R001928/1) Full details about this dataset can be found at https://doi.org/10.5285/cc4c656f-4e4d-4f26-af23-69b4f007e43f

  • These databases contain collated trait data for 925 species of macro- and micro-moths recorded on the Landscape-scale Species monitoring of Agri-Environment Schemes (LandSpAES) project, on farmland in six regions of England (The Fens, High Weald, South Suffolk / North Essex, Warwickshire, Yorkshire Dales, Dartmoor) during 2017-2021. The traits collated include life cycle ecology and phenology, conservation status and relative abundance, host plant specificity and characteristics, adult feeding, pupal habitat, breeding habitat, and morphological characteristics. Broader categories, such as breeding habitat, are also split into sub-categories. Full details about this dataset can be found at https://doi.org/10.5285/8f9bb7c8-42b6-46f3-9718-84755810be7a

  • The dataset comprises of physical and biogeochemical measurements of saltmarsh soils from across 22 UK saltmarshes. Between 2018 and 2021, 462 narrow diameter gouge cores (30 mm in diameter) were collected as part of the Carbon Storage in Intertidal Environments (C-SIDE) project to facilitate the calculation of saltmarsh soil organic carbon stocks. Sites were chosen to represent contrasting habitats types in the UK, in particular sediment types, vegetation and sea level history. The data provides a quantitative measure of soil dry bulk density and organic carbon content across varies substrate and marsh types. The work was carried out under the NERC programme - Carbon Storage in Intertidal Environment (C-SIDE), NERC grant reference NE/R010846/1. Full details about this dataset can be found at https://doi.org/10.5285/d301c5f5-77f5-41ba-934e-a80e1293d4cd

  • This dataset consists of plant species presence and abundance in different sizes and types of plots from 591 1km x 1km square sites surveyed across Great Britain in 2007. Many of the plots are repeated from surveys in 1978, 1990 and 1998. General information about the plot was recorded including plot number and type as well as species presence and (usually) cover. Data were collected under the Countryside Survey long term monitoring project managed by the Centre for Ecology & Hydrology. Full details about this dataset can be found at https://doi.org/10.5285/57f97915-8ff1-473b-8c77-2564cbd747bc

  • This dataset contains greenhouse gas flux data and vegetation survey data from an experiment based at Parsonage Down, UK. The vegetation survey comprises total species percentage cover and species richness data from four 50 cm by 50 cm quadrats. The greenhouse gas flux data comprises net ecosystem carbon dioxide exchange, photosynthesis and respiration data measured with an Infra-red Gas Analyser (IRGA); methane, carbon dioxide and nitrous oxide data measured using gas chromatography; and nitrate and ammonium from soil samples extracted with potassium chloride. The experiment investigated the effect of different plant groups on soil carbon stores and nutrient cycling, by using a mixture of hand weeding and herbicide spot spraying to create different plant communities on the species rich grassland at Parsonage Down. The resulting carbon and nutrient cycling rates were compared to the characteristics of the plant groups. The experiment ran from 2013 to 2015 and this dataset contains data from 2014 only. This experiment was part of the Wessex BESS project, a six-year (2011-2017) project aimed at understanding how biodiversity underpins the ecosystem functions and services that landscapes provide. Full details about this dataset can be found at https://doi.org/10.5285/e05b350f-3cf4-4f8d-aa3c-24d562ca756b

  • Baseline Vegetation data from the UK Environmental Change Network (ECN) terrestrial sites. These data are collected at all of ECN's terrestrial sites using a standard protocol (see supporting documentation). This was a one-off whole site baseline vegetation survey (though given the intensive nature of this survey, some sites did it over successive years) to generate a vegetation map and identify the areas within the site to be monitored. In this protocol up to 500 systemic 2m x 2m plots were surveyed and species presence recorded. ECN is the UK's long-term environmental monitoring programme. It is a multi-agency programme sponsored by a consortium of fourteen government departments and agencies. These organisations contribute to the programme through funding either site monitoring and/or network co-ordination activities. These organisations are: Agri-Food and Biosciences Institute, Biotechnology and Biological Sciences Research Council, Cyfoeth Naturiol Cymru - Natural Resources Wales, Defence Science & Technology Laboratory, Department for Environment, Food and Rural Affairs, Environment Agency, Forestry Commission, Llywodraeth Cymru - Welsh Government, Natural England, Natural Environment Research Council, Northern Ireland Environment Agency, Scottish Environment Protection Agency, Scottish Government and Scottish Natural Heritage. Full details about this dataset can be found at https://doi.org/10.5285/a7b49ac1-24f5-406e-ac8f-3d05fb583e3b

  • Growth parameters for tree seedlings in a lowland tropical forest in Panama, subject to experimental soil warming. The experiment is situated at the Soil Warming Experiment in Lowland Tropical Rainforest (SWELTR) on Barro Colorado Island in Panama, where the whole soil profile is subject to warming by 4-degrees. Seedling species are Inga laurina, Ormosia macrocalyx, Tachigali versicolor, Lacmellea panamensis, Protium pittieri and Virola surinamensis. Data are seedling parameters: relative growth rates, height change over time, herbivory index, light-saturated photosynthesis (Amax), leaf chlorophyll concentration, light (photosynthetic photon flux density; PPFD). We also determined soil nutrient (N and P) mineralisation for the same period using in situ ion-exchange resins each month. Data were collected over the period 2016 to 2020, following 3 years of soil warming. Photosynthesis and leaf chlorophyll content index data were collected in field campaigns during 2019 and 2022, respectively. Full details about this dataset can be found at https://doi.org/10.5285/3a4aabba-e790-4ac3-b845-936790768330

  • This dataset consists of structure, biomass (carbon density) and biodiversity (plant species richness) from forest inventory plots at forest restoration sites in South and Southeast Asia and the code for the analyses of these data as conducted in Banin, Raine et al (2023). The recorded data consists of plot level censuses carried out up to May 2021 collated from published studies, grey literature and data provided by co-authors. This represents the collation of data from 11 sites in areas where disturbance had led to the clearance or degradation of natural forest. Plots where tree seedlings were planted (active restoration) and plots where no seedling planting took place (natural regeneration) were censused for structure, biomass and/or biodiversity. Some of the sites in the dataset also recorded data at old growth forest plots for reference, and/or provided repeat measures of forest metrics over time. The dataset also includes the code used for analysis of this plot level data, used to compare the outcome of different restoration approaches. Full details about this dataset can be found at https://doi.org/10.5285/3d3b1d09-9e7a-4144-b8a1-b09a3c573466