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Microzooplankton taxonomic abundance in water bodies

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  • The dataset comprises physical, biogeochemical and biological measurements from the Southern Ocean. The data were collected in the Bransfield and Gerlache Straits and Bellingshausen Sea between 1995 and 1996. Hydrographic casts provided profiles of temperature, salinity, dissolved oxygen, transmittance, chlorophyll and photosynthetically active radiation, while water samples were analysed for bacteria, zooplankton and a biogeochemical parameters such as nutrient concentrations. Sediment cores were also analysed for nutrients, while drifting traps provided sedimentation flux measurements and shipboard experiments yielded production data. The majority of measurements were collected during two consecutive cruises of the BIO Hesperides between early December 1995 and early February 1996. The hydrographic profiles were collected using a CTD and the data were stored as approximately 300 individual ASCII files per cruise, with data stored at 1dbar resolution. Several hundred discrete measurements (water samples and sediment cores) were collected in total. An array of moorings deployed for one year in the Western Bransfield Strait Basin provided sediment trap samples for biological and biogeochemical analysis. The FRUELA project was part of the Spanish contribution to the study of biogeochemical carbon fluxes in the Southern Ocean. Three major zones, with contrasting physico-chemical and biological characteristics were considered: Bellingshausen, including the Northwest Bellingshausen Sea and comprising the southern boundary of the Antarctic Circumpolar Current (SbyACC); Bransfield, including the Western Bransfield Strait and the northeastern part of the Gerlache Strait; and Gerlache, including the rest of the Gerlache Strait. The research involved a number of Spanish institutions and was coordinated by the University of Oviedo and the Institute of Marine Sciences (CSIC). The data are held by the British Oceanographic Data Centre.

  • The dataset comprises physical, biogeochemical and biological measurements of water column properties. Hydrographic profiles of water temperature, salinity, fluorescence, turbidity, attenuance, dissolved oxygen and photosynthetically active radiation were collected, and were supplemented by measurements of surface ocean (temperature, salinity, fluorescence, attenuance) and meteorological (air pressure, air temperature, humidity, wind, irradiance) properties, as well as bathymetry. A comprehensive water sampling program provided biogeochemical data including measurements of dimethyl sulphide (DMS), dimethylsulphionopropionate (DMSP), nutrients, halocarbons, methylamines, pigments, radiogeochemistry and dissolved organic carbon (DOC). Biological data were also collected, including samples of viruses, bacteria, phytoplankton, micro- and mesozooplankton. Currents throughout the water column were measured both at fixed locations and across the study area, while Lagrangian experiments provided further current data. The datqa were collected in the northern North Sea between 5th June 1999 and 1st July 1999 during RRS Discovery cruise D241. Hydrographic profiles were collected using a conductivity-temperature-depth (CTD) package with attached auxiliary sensors, an undulating oceanographic recorder (UOR), a vessel-mounted acoustic Doppler current profiler (ADCP), moored ADCP and temperature sensors, and a suite of standard underway hydrographic and meteorological sensors. Water samples for biogeochemical and biological analyses were collected from both the underway system and CTD bottles, while nets were deployed to collect zooplankton samples. Plankton samples were supplemented by respiration experiments conducted during the cruise. The Lagrangian current data were gathered from four drifters and a tracer experiment where the distribution of sulphur hexafluoride (SF6) released from the ship was monitored via water samples collected from the CTD and the underway system. A survey of the region was carried out in order to locate an Emiliania huxleyi bloom suitable for the study and the chosen bloom was labelled with the SF6 tracer. The biogeochemical process study followed the patch as it drifted in a SE direction and was eventually subducted under Norweigian coastal water on 26 June. The study aimed to investigate DMS biogeochemistry within a coccolithophore bloom. The research was organised by NERC's Plymouth Marine Laboratory and involved the University of East Anglia, Scottish Association for Marine Science, Dunstaffnage Marine Laboratory, Marine Biological Association, Defence Research Agency, and Southampton Oceanography Centre. Data management support for the project is provided by the British Oceanographic Data Centre (BODC). The dataset is available on CD-ROM and can be requested from BODC.

  • This cross-disciplinary project resulted in a diverse data catalogue. This includes meteorology (2-D wind speed and direction, total irradiance, Photosynthetically Active Radiation/PAR, air temperature, atmospheric pressure, humidity); atmospheric composition (chemical analyses of aerosol particle composition) and biological, chemical and physical properties and processes in the photic zone (optical properties of the water column; chlorophyll concentration; photosynthetic pigment composition; primary production; bacterial production; phytoplankton and bacterial speciation; concentrations of biogenic trace compounds such as iodocarbons, methyl bromide, dimethyl sulphide/DMS and dimethyl sulphoniopropionate/DMSP; trace gas production; plankton community composition; nutrient concentration; concentrations of trace metals such as iron; salinity; temperature; Dissolved Organic Matter - particulate carbon, nitrogen and phosphorus; phytoplankton growth rates, grazing mortality and viral lysis; ammonium regeneration, nitrification and nitrogen fixation; gross production, net community production and dark community respiration; zooplankton ecology). The fieldwork included two dedicated research cruises in the eastern North Atlantic Ocean, spanning the period April - May 2004. Measurements of nutrient cycling and biological activity were monitored prior to and after deployment (IN stations) of patches fertilised with iron and phosphate relative to several (OUT stations) controls. Measurements were taken using a variety of instrumentation, including conductivity-temperature-depth (CTD) profilers with attached auxiliary sensors and acoustic Doppler current profilers (ADCPs), while incubation chambers were used for shipboard experiments. Samples were collected with Niskin bottles attached to the CTD frame at different depths in the water column and samples analysed onboard or preserved for analysis back in the laboratory. The FeeP data set was intended to advance understanding of how the supply and mutual interactions between iron and phosphate control biological activity and fluxes in the subtropical North Atlantic. The study led by the Plymouth Marine Laboratory (PML) united marine scientists from institutions across the UK and international collaborators. It was funded by the UK Natural Environment Research Council. The data are held at the British Oceanographic Data Centre (BODC) and have been incorporated into the National Oceanographic Database (NODB).

  • The data set comprises hydrographic, biogeochemical and biological data, including measurements of temperature, salinity and attenuance, plus concentrations of parameters such as nutrients, pigments, urea, hydrocarbons, sedimentation flux, sulphur and dissolved carbon. Analyses of bacterial, zooplankton and phytoplankton communities were also undertaken. The oceanographic data were supplemented by measurements of surface meteorological parameters. Data were collected across three repeated sections: one along the Gulf of Oman; a section at 67deg East from 8 to 14.5deg North; and a major section from 8deg North, 67 deg East to the coast of Oman. Other one-off sections were also traversed in the Arabian Sea and Gulf of Oman areas. Measurements were collected during two cruises: one between 27 August and the 4 October 1994 and the other between the 16 November and the 19 December 1994. Sections were covered by underway surface ocean measurements (one minute sampling of multiple parameters providing some 5 million measurements) complemented by a total of 21 CTD/water-bottle stations, 14 of which were repeated. ARABESQUE was organised by the Plymouth Marine Laboratory of NERC's Centre for Coastal and Marine Sciences and involved the University of Wales, Bangor; Queen's University of Belfast; University of East Anglia; University of Edinburgh; University of Newcastle; the Bedford Institute of Oceanography, Canada; the Max Planck Institute for Limnology, Germany and the Sultan Qaboos University, Oman. Data management support for the project was provided by the British Oceanographic Data Centre. All data collected as part of the project were lodged with BODC who had responsibility for assembling, calibrating, quality controlling and fully documenting the data. BODC checked for instrument spikes or malfunction, values beyond the calibration range, unreasonable ratios of chemical constituents and unreasonable deviations from climatological means. Data were assembled into a relational database, complete with supporting documentation and a user manual. The full data set has been published by BODC on CD-ROM complete with user interface.

  • The Marine Productivity (MarProd) programme data set comprises physical, biological and biogeochemical data, including hydrographic profiles (temperature, salinity, fluorescence, dissolved oxygen, photosynthetically active radiation (PAR)), and samples of nutrients, suspended particulate material, dissolved material, phytoplankton and zooplankton. These data were supplemented by continuous underway measurements of bathymetry, surface hydrography (temperature, salinity, fluorescence and attenuance), meteorology (wind speed and direction, PAR and total incident irradiance, air temperature, humidity and atmospheric pressure), remote sensing of sea surface temperature and ocean colour, and by production experiments. The data were collected in UK shelf seas and the North Atlantic Ocean between 2000 and 2002. Surface biogeochemical parameters (nutrients, photosynthesis, production, suspended particulate material and dissolved organic material) were measured during cruises in the Irish Sea in May, June and July 2001, while ongoing hydrographic and plankton time-series at Plymouth Marine Laboratory's L4 sampling station are also included in the data set. However, the bulk of the data were collected during a major fieldwork campaign of four dedicated research cruises on RRS Discovery between November 2001 and December 2002. A total of over 800 gear deployments were performed at 159 stations mainly distributed in the Irminger Sea and Iceland Basin, facilitating the measurement of water mass distribution, velocity field and mixed layer properties. A comprehensive water sampling programme was undertaken for the purposes of plant pigment and microscopic analyses; biomass estimations of different taxonomic/functional groups of microplankton (picoplankton, phytoplankton and microzooplankton); high resolution profiles of inorganic nutrient concentrations; and determination of abundance of key zooplankton species (Calanus finmarchicus, Oithona spp. and euphausiids). Process studies were undertaken to obtain information about factors controlling the reproduction, growth, mortality and behaviour of individual species using physiological studies (feeding experiments, egg production and nauplii development, species interactions) and analyses of biochemical composition (lipids and hormones studies, analyses of carbon/nitrogen and stable isotope ratios composition). Phytoplankton primary production was measured using carbon uptake on the last two cruises and additional data were collected using a Fast Repetition Rate Fluorometer (FRRF) through continuous surface underway sampling and vertical deployments. MarProd's main objective was to investigate the population dynamics of key zooplankton species in UK shelf seas and in the northern Atlantic with emphasis on the manner in which physical factors such as water temperature and oceanic currents influence their distribution, abundance and productivity. The MarProd Programme involved researchers from numerous institutions from the UK, Ireland and Spain. The data are archived at the British Oceanographic Data Centre.

  • The programme involved two major fieldwork activities: a deep ocean research cruise and a programme of freshwater studies. The marine component of the dataset generated a total of 430 distinct variables, quantifying the meteorology, hydrography, chemistry, biogeochemistry, and the microbial plankton (bacteria, phytoplankton and microzooplankton) biomass, taxonomic composition along the 5500 km cruise track in the Indian Ocean during August-September 2001. Measurements were mainly made on water samples collected either from the sea surface while the ship was underway or from a range of depths during conductivity-temperatue-depth (CTD) and water sampling stations at each of 11 sites occupied in the Indian Ocean. The maximum depth sampled at open ocean sites ranged from 300 to 3000 m. Short sections of 300 m deep CTD and fluorescence profiles were also obtained using a moving vessel profiler (MVP). The freshwater component of the dataset generated variables from Priest Pot in the Lake District and from a range of other freshwater sites around the UK. It contains underpinning weekly time-series measurements characterising the physical, chemical and biological condition of the water column at the Priest Pot sampling site between 2002-2004, together with data from studies focused on the seasonal and spatial dynamics of viruses, bacteria and picophytoplankton, trace metal distribution and the ubiquity of microbial protists. The database also contains 376 gene sequences from genetic material extracted from environmental samples. The programme was a 5-year Thematic Programme funded by the Natural Environment Research Council (NERC) and the purpose of the study was to improve understanding of aquatic microbial biodiversity, with the emphasis on community interactions, ecosystem function (e.g. biogeochemical cycling of carbon and nutrients, and the potential for biotechnological exploitation. The programme involved scientists from the Plymouth Marine Laboratory, the National Oceanography Centre Southampton, University of Cardiff School of Biosciences, University of Cardiff School of Earth and Ocean Sciences, University of Warwick School of Biological Sciences, University of Newcastle School of Civil Engineering and Geosciences, University of Bristol School of Biological Sciences, University of Oxford Department of Zoology, University of Liverpool School of Biological Sciences, University of Stirling School of Biological and Environmental Sciences, the Marine Biological Association of the UK, Lancaster University Department of Environmental Science and the Centre for Ecology and Hydrology (CEH) Lancaster and Dorset.

  • The dataset comprises a wide range of physical and biogeochemical oceanographic and atmospheric parameters, plus additional biological measurements and observations. Hydrographic parameters include temperature, salinity, current velocities, fluorescence and attenuance, while biogeochemical and biological analyses of water samples provided measurements of dissolved gases, hydrocarbons, sulphur species, dissolved organic carbon (DOC), halocarbons, nutrients, pigments, bacteria, phytoplankton and zooplankton. Bird identification and cetacean abundance studies were also undertaken, as were tracer release experiments using both inert chemical (sulphur hexafluoride, SF6) and bacterial (Bacillus globigii) tracers. Meteorological data were also collected, including concentrations of various chemicals, supplemented by standard measurements of air temperature, pressure, irradiance, humidity and wind velocities. The data were collected in the North Atlantic Ocean and North Sea between 1996 and 1998, as follows: Eastern Atlantic off the coast of Ireland (June-July 1996 and May 1997); southern North Sea (October-November 1996); and North Eastern Atlantic between the UK and Iceland (June-July 1998). The data were collected during four cruises (RRS Challenger CH127, CH129, CH133 and RRS Discovery D234) using a variety of equipment, including instrumentation deployed at sampling stations (e.g. conductivity-temperature-depth (CTD) profilers) and underway sensors that ran throughout each cruise, yielding continuous measurements of both hydrographic and meteorological parameters. Discrete air and water samplers were also used to measure atmospheric and hydrographic parameters throughout each cruise. The data collection periods were associated with individual ACOSE air-sea exchange experiments: two Eastern Atlantic Experiments (EAE96 and EAE97); ASGAMAGE in the southern North Sea; and the North Atlantic Experiment, NAE. ACSOE was a 5-year UK NERC Thematic Research Programme investigating the chemistry of the lower atmosphere (0 - 12 km) over the oceans. The Marine Aerosol and Gas Exchange (MAGE) study group was the only component of the ACSOE Project that included measurements in the marine environment. ACSOE data management was a shared responsibility between the British Atmospheric Data Centre (BADC) and the British Oceanographic Data Centre (BODC). BODC handled the management of ship data as well as all other data collected in the water column during the ACSOE/MAGE cruises. BODC assisted in the onboard collection and subsequent working up of ship data, and assembled all marine data in BODC's relational database carrying out quality control and data processing as required. ACSOE was led by Prof. Stuart Penkett of the University of East Anglia and cruise principle scientists included representatives of the University of Newcastle Upon Tyne, and the University of East Anglia.

  • The UK Surface Ocean-Lower Atmosphere Study (UK SOLAS) marine fieldwork data set comprises all data, marine or otherwise, collected during sea-going activities. The fieldwork included eight dedicated research cruises in the eastern North Atlantic Ocean, spanning the period 2006-2008. These cross-disciplinary missions resulted in a diverse data catalogue. This includes meteorology (3-D wind speed and direction, total irradiance, Photosynthetically Active Radiation/PAR, air temperature, atmospheric pressure, humidity, aerosol optical thickness); atmospheric composition (carbon dioxide concentration, aerosol particle counts and size spectra, chemical analyses of aerosol particle composition, cloud condensation nuclei/CCN, concentrations of pollutants such as black carbon, concentrations of free radical species such as iodine monoxide and nitrate radicals); chemical and energy-fluxes across the air-sea boundary (dust deposition rates, oxygen and nitrogen fluxes, carbon dioxide fluxes, sensible heat fluxes, latent heat fluxes, momentum fluxes); biological, chemical and physical properties and processes in the sea surface micro-layer (chlorophyll concentration, bacterial production, phytoplankton and bacterial speciation, concentrations of biogenic trace compounds such as halocarbons, nitrous oxide, dimethyl sulphide/DMS and alcohols, surfactant concentrations, halogen concentrations such as iodine, iodide and iodate); biological, chemical and photochemical properties and processes in the ocean subsurface (primary productivity, trace gas production, plankton community composition, nutrient concentration, concentrations of trace metals such as iron, aluminium, manganese, magnesium and cobalt, ligand and complex metal chemistry parameters such as heme, dust dissolution, salinity, temperature, amino acids and urea, carbonate system chemistry including alkalinity); and sea-state physics (breaking waves, wave slope, whitecaps, bubble size spectra, aerosol formation, subsurface acoustics). Additionally, time series of air-sea fluxes were measured from the Norwegian weather ship, Polarfront, between 2006 and 2009. UK SOLAS scientists also participated in the Bergen Mesocosm experiment during 2008. This simulated gas exchanges and biological, chemical and photochemical properties and processes in the sea surface micro-layer under controlled conditions. The study united atmospheric and marine scientists from institutions across the UK and international collaborators. The UK SOLAS data set was intended to advance understanding of the mutual interactions between the atmosphere and the oceans, especially the chemical exchanges that affect ocean productivity, atmospheric composition and climate. It was funded by the UK Natural Environment Research Council, as the UK's contribution to the international Surface Ocean-Lower Atmosphere Study (SOLAS). The data are held at the British Oceanographic Data Centre (BODC) and have been incorporated into the National Oceanographic Database (NODB). Data collected from non-ship based activities, for example land-based atmospheric data and data resulting from campaigns using the Facility for Airborne Atmospheric Measurements (FAAM) aircraft are held at the British Atmospheric Data Centre (BADC).

  • The dataset comprises hydrographic profiles (temperature, salinity, oxygen, fluorometer, transmissometer, irradiance) and along track measurements (bathymetry, surface meteorology, sea surface hydrography), with discrete measurements including water chemistry (organic and inorganic nutrients, particulate organic carbon and nitrogen, dissolved gases, trace metals), biology (phytoplankton, zooplankton, primary production, community respiration, chlorophyll, pigments) and atmospheric particulates (major ions, organics and trace metals). Data have been collected from meridional transects of the Atlantic Ocean (between the UK and the Falkland Islands, South Africa or South America) from 1995 to the present day. The Atlantic Meridional Transect (AMT) programme aims to study the factors determining the ecological and biogeochemical variability of planktonic ecosystems in the tropical and temperate Atlantic Ocean, and their links to atmospheric processes. The majority of the data are available to academia for re-use and re-purpose but data from recent cruises may be subject to a moratorium which allows first use for data originators. The AMT is coordinated by Andy Rees (AMT Principal Investigator) and Miss Dawn Ashby (AMT Project Officer) at the Plymouth Marine Laboratory (PML) in conjunction with the National Oceanography Centre. Since its inception the programme has involved researchers from several different countries and has acted as a platform for national and international collaboration. Data are managed by the British Oceanographic Data Centre.