Antibiotic resistance and resistant genes in Escherichia coli from human, poultry and environmental samples in urban and rural Bangladesh (2017-18)
The dataset includes information on antibiotic-resistance and resistance genes in bacteria (Escherichia coli) from humans, poultry and the environment in rural households, poultry farms and urban food markets. The rural households and poultry farms (broiler chickens) were located in Mirzapur, Tangail district; and urban food markets were located in Dhaka city, Bangladesh. Environmental samples were collected from surface water, water supply, wastewater, soil, animal faeces (poultry and cattle) and solid waste between February 2017 and October 2018 . DNA samples from antibiotic-resistant bacteria found in all samples were analysed for quantitative assessment of two resistance genes. Trained staff from the International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b) undertook sample collection and laboratory analysis. The aim of the study was to assess the prevalence and abundance of antibiotic-resistant bacteria and associated genes among humans, poultry and environmental compartments in Bangladesh. The survey was part of a wider research project, Spatial and Temporal Dynamics of Antimicrobial Resistance Transmission from the Outdoor Environment to Humans in Urban and Rural Bangladesh. The research was funded by NERC/BBSRC/MRC on behalf of the Antimicrobial Resistance Cross-Council Initiative award NE/N019555/1. Full details about this dataset can be found at
https://doi.org/10.5285/0239cdaf-deab-4151-8f68-715063eaea45
- Identification
- Distribution
- Quality
- Spatial rep.
- Ref. system
- Content
- Portrayal
- Metadata
- Md. constraints
- Md. maintenance
- Schema info
Identification
Data identification
Citation
- Dataset Reference Date ()
- 2019-02-08
- Identifier
- doi: / 10.5285/0239cdaf-deab-4151-8f68-715063eaea45
- Other citation details
- Rousham, E.K., Islam, M.A., Unicomb, L., Asaduzzaman, M., Islam, R., Amin, B. , Mozmader, T.I.M.A, Hossain M. I., Rahman, M., Wood, P. J. (2019). Antibiotic resistance and resistant genes in Escherichia coli from human, poultry and environmental samples in urban and rural Bangladesh (2017-18). NERC Environmental Information Data Centre 10.5285/0239cdaf-deab-4151-8f68-715063eaea45
International Centre for Diarrhoeal Disease Research, Bangladesh
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Islam, M.A.
https://orcid.org/0000-0001-5107-5289
International Centre for Diarrhoeal Disease Research, Bangladesh
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Asaduzzaman, M.
https://orcid.org/0000-0001-9048-7980
- Maintenance and update frequency
- notPlanned
Legal constraints
- Limitations on Public Access
- otherRestrictions
- Other constraints
- no limitations
Legal constraints
- Use constraints
- otherRestrictions
Legal constraints
- Use constraints
- otherRestrictions
- Other constraints
- © Loughborough University
Legal constraints
- Use constraints
- otherRestrictions
- Other constraints
- © International Centre for Diarrhoeal Disease Research, Bangladesh
Legal constraints
- Use constraints
- otherRestrictions
- Other constraints
- If you reuse this data, you should cite: Rousham, E.K., Islam, M.A., Unicomb, L., Asaduzzaman, M., Islam, R., Amin, B. , Mozmader, T.I.M.A, Hossain M. I., Rahman, M., Wood, P. J. (2019). Antibiotic resistance and resistant genes in Escherichia coli from human, poultry and environmental samples in urban and rural Bangladesh (2017-18). NERC Environmental Information Data Centre https://doi.org/10.5285/0239cdaf-deab-4151-8f68-715063eaea45
- Spatial representation type
- textTable
- Distance
- 1 urn:ogc:def:uom:EPSG::9001
- Metadata Language
- English (en)
- Character set
- utf8
- Topic category
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- Health
- Begin date
- 2017-02-01
- End date
- 2018-10-31
N
S
E
W
Distribution
Distribution
- Data format
-
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Comma-separated values (CSV)
()
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Comma-separated values (CSV)
()
- Resource Locator
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Download the data
Download a copy of this data
- Resource Locator
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Supporting information
Supporting information available to assist in re-use of this dataset
Quality
Data quality
Scope
- Quality Scope
- dataset
- Other
- dataset
Report
Citation
- Dataset Reference Date ()
- 2010-12-08
- Statement
- Samples were collected in the field and transported to the International Centre for Diarrhoeal Disease Research, Bangladesh to undergo laboratory analysis and storage. Field measurements and laboratory results were recorded on paper-based forms or generated from automated readings, entered into Excel then converted to .csv files for ingestion into the Environmental Information Data Centre.
Ref. system
- Code
- WGS 84
Metadata
Metadata
- File identifier
- 0239cdaf-deab-4151-8f68-715063eaea45 XML
- Metadata Language
- English (en)
- Character set
- ISO/IEC 8859-1 (also known as Latin 1)
- Resource type
- dataset
- Hierarchy level name
- dataset
- Metadata Date
- 2024-03-01T11:27:38
- Metadata standard name
- UK GEMINI
- Metadata standard version
- 2.3
NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg
,
Lancaster
,
LA1 4AP
,
UK
https://eidc.ac.uk/