Remineralisation of organic carbon by marine bacterioplankton (REMAIN) project oceanographic and eykariotic plankton respiration datasets (2017-2022)

This dataset is comprised of laboratory based culture experiments with five eukaryotic plankton species. The plankton were grown in culture media made up in filtered seawater collected from the continuous seawater supply system in the laboratories of the Centre for Environment Fisheries and Aquaculture Science (Cefas) in Lowesoft, UK, pumped from the North Sea. Experiments were undertaken between December 2017 and Novemeber 2022. The dataset also includes environmental data: dissolved oxygen concentration from water samples collected from CTD casts on the AMT28 cruise which took place from September 23 to October 30, 2018. This study contributes to the ‘Marine bacterioplankton respiration: a critical unknown in global carbon budgets’ project funded by The Leverhulme Trust (RPG-2017-089) and the ‘Remineralisation of organic carbon by marine bacterioplankton (REMAIN)’ project funded by NERC Discovery Science (grant reference NE/R000956/1 active from December 01, 2017 to November 30, 2022). Data were generated by Carol Robinson, Isabel Seguro, and E. Elena Garcia-Martin of the University of East Anglia.

Alternate title: British Oceanographic Data Centre record 1048NE-R000956-1

Date (Publication): 2022-03-02

Date (Creation): 2025-01-08

Date (Revision): 2025-01-10

Identifier: http://www.bodc.ac.uk/ / EDMED6962

Owner

University of East Anglia, School of Environmental Sciences - Unknown ( Unknown )

University Plain , Norwich , NR4 7TJ , United Kingdom

http://www.uea.ac.uk/environmental-sciences/

Originator

University of East Anglia, School of Environmental Sciences - Unknown ( Unknown )

University Plain , Norwich , NR4 7TJ , United Kingdom

http://www.uea.ac.uk/environmental-sciences/

Custodian

British Oceanographic Data Centre - Director

Joseph Proudman Building , 6 Brownlow Street , Liverpool , Merseyside , L3 5DA , United Kingdom

https://www.bodc.ac.uk/

Distributor

British Oceanographic Data Centre - Director

Joseph Proudman Building , 6 Brownlow Street , Liverpool , Merseyside , L3 5DA , United Kingdom

https://www.bodc.ac.uk/

Maintenance and update frequency: asNeeded As needed

SeaVoX Vertical Co-ordinate Coverages

unknown

SeaDataNet Parameter Discovery Vocabulary

GEMET - INSPIRE themes, version 1.0

MEDIN metadata record availability

Access constraints: otherRestrictions Other restrictions

Other constraints: No limitations apply

Other constraints: Data are freely available to all following agreement to the terms and conditions of a Data Licence

Use constraints: otherRestrictions Other restrictions

Other constraints: Usage restrictions are specified in the terms of the licence

Spatial representation type: Text, table

Metadata language: EnglishEnglish

Topic category

Biota
Oceans

Geographic identifier

North Atlantic Ocean

Date (Revision): 2024-12-11

Geographic identifier

South Atlantic Ocean

Date (Revision): 2024-12-11

Begin date: 2017-12-01

End date: 2022-11-01

Unique resource identifier: urn:ogc:def:crs:EPSG::4326

Codespace: OGP

Distribution format

Delimited ()

OnLine resource: Published dataset - doi:10.5285/19bd30b9-b479-6f11-e063-7086abc02bed
Widdicombe C.E., Rooks P.A., Liszka C., Seguro I., Robinson C. (2024). Phytoplankton identification from CTD niskin collected depth profiles along the Atlantic Meridional Transect during cruise AMT28 (JR18001) from September to October 2018. NERC EDS British Oceanographic Data Centre NOC doi: 10.5285/19bd30b9-b479-6f11-e063-7086abc02bed

OnLine resource: Published dataset - doi:10.5285/186cbb2a-642c-eaa0-e063-7086abc04047
Liszka C., Seguro I., Robinson C. (2024). Dissolved Organic Carbon (DOC) and Dissolved Organic Nitrogen (DON) measurements from CTD Niskin collected depth profiles along the Atlantic Meridional Transect during cruise AMT28 (JR18001) from September to October 2018. NERC EDS British Oceanographic Data Centre NOC doi: 10.5285/186cbb2a-642c-eaa0-e063-7086abc04047

OnLine resource: Published dataset - doi:10.5285/19bd57bd-f01d-870f-e063-7086abc0ccfa
Seguro I., Liszka C., Robinson C. (2024). Microbial diversity by 16S and 18S RNA analysis during Atlantic Meridional Transect cruise AMT28 (JR18001) from September to October 2018. NERC EDS British Oceanographic Data Centre NOC doi: 10.5285/19bd57bd-f01d-870f-e063-7086abc0ccfa

OnLine resource: Published dataset - doi:10.5285/20343353-88ee-b372-e063-7086abc03c87
Seguro I., Robinson C. (2024). Natural plankton respiration measured by oxygen consumption and Iodo-Nitro-Tetrazolium (INT) reduction methods during Atlantic Meridional Transect cruise AMT28 (JR18001) between September 2018 and October 2018. NERC EDS British Oceanographic Data Centre NOC doi: 10.5285/20343353-88ee-b372-e063-7086abc03c87

OnLine resource: Published dataset - doi:10.5285/2be8f599-592c-5de2-e063-7086abc02acd
Seguro I., Robinson C., Vikström K. (2025). Respiration measurements of prokaryoplankton cultures with the INT method and oxygen consumption during laboratory experiments, May 2021-May 2022 NERC EDS British Oceanographic Data Centre NOC doi: 10.5285/2be8f599-592c-5de2-e063-7086abc02acd

OnLine resource: Published dataset - doi:10.5285/2cfff2ba-e643-5abf-e063-7086abc0ac45
Liszka C., Seguro I., Robinson C. (2025). Dissolved Organic Phosphorous (DOP) measurements from CTD Niskin collected depth profiles along the Atlantic Meridional Transect during cruise AMT28 (JR18001) from September to October 2018 NERC EDS British Oceanographic Data Centre NOC doi: 10.5285/2cfff2ba-e643-5abf-e063-7086abc0ac45

Hierarchy level: dataset Dataset

Conformance result

Date (Publication): 2010-12-08

Explanation: BODC protocols are based on the Open Archival Information System (OAIS) model enabling BODC to iterate towards compliance with the on-going evolution and development of community requirements including FAIR (Findable,Accessible,Interoperable,Reusable), TRUST (Transparency, Responsibility, User community, Sustainability, Technology) and CARE (Collective Benefit, Authority to Control, Responsibility, Ethics). Data managers quality assure submissions and assemble the metadata necessary for curation. Submissions (as received) are placed in a long-term accession and stored in triplicate across multiple sites. Appropriate data are transferred into a standard internal format with source variable names mapped to controlled vocabularies, documentation assembled, and metadata loaded into BODC databases. Access to these data is through direct request, the BODC website and through partner repositories such as SeaDataNet. Access control is attained by assigning a data policy to each set of data and this policy is used to administer access when data are requested. Discovery metadata is aligned with EU INSPIRE (through MEDIN) and SeaDataNet community standards. Data are converted to open community formats including Ocean Data View ASCII and SeaDataNet NetCDF, with data described using terms from the NERC vocabulary server. BODC submission agreements are documented on the BODC website and customer service is assured with a dedicated requests team that serve data following local regulations including General Data Protection Regulation (GDPR) 2018 and Environmental Information Regulations (EIR) 2004.

Pass: Yes

Statement: This dataset was created by scientists for the NERC Discovery Science project titled ‘Remineralisation of organic carbon by marine bacterioplankton (REMAIN)’ with grant reference NE/R000956/1 along with funding from the Leverhulme Trust (grant reference RPG-2017-089) following their in-house data processing and quality control procedures. The data were then provided to the British Oceanographic Data Centre (BODC) for long-term archive and data publication in the BODC Published Data Library. Some of the data were then provided to the British Oceanographic Data Centre (BODC) for ingestion into one of the schemas of the National Oceanographic Database (NODB). During ingestion BODC undertake quality control, documentation and metadata enhancement procedures appropriate to the type of data. For an overview please see http://www.bodc.ac.uk/about/information_technology/data_processing_steps/. BODC supply full information about data collection, data processing and data quality with all data requests to enable users to assess data suitability themselvesInstrument(s) used to collect data: continuous water samplers; CTD.

File identifier: eb803fe75b1850578c280ec8835410c4 XML

Metadata language: EnglishEnglish

Hierarchy level: dataset Dataset

Date stamp: 2025-03-14T17:12:15

Metadata standard name: MEDIN

Metadata standard version: 3.1.1

Point of contact

British Oceanographic Data Centre - Polly Hadžiabdić ( Head of the BODC Requests Team )

Joseph Proudman Building , 6 Brownlow Street , Liverpool , Merseyside , L3 5DA , United Kingdom

https://www.bodc.ac.uk/

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