Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019
The data provided here are model iteration objects and rasters needed to run the multi-scale modelling process and predict how the host condition affects probability of Hendra virus shedding. The dataset contains predictions of three proxies for host conditions (including food shortage, rehabilitation admissions and formation of a new roost) across eastern Australia in 2008-2019. The Roost Species Distribution Model (SDM) has predictions of roost suitability. These are monthly, spatially explicit predictions of particular conditions or probability of roost occupations. The model objects are iterations of models that were initially trained on data held in figshare (https://figshare.com/s/ddb5a1584609b20f6596). These data objects are linked with code provided at
https://github.com/hanlab-ecol/BatOneHealth
to be able to run the models and analyses. This includes comparisons of virus predictions of seven different multiscale model structures to observed Hendra virus shedding in field surveys. The purpose of this study was to determine if quantifying and incorporating host condition into epidemiological models improves predictions of virus shedding in space and time. The data objects relate to the 1,000 iterations run of this process to better able to account for uncertainty. Full details about this dataset can be found at
https://doi.org/10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
Simple
- Date (Publication)
- 2025-03-03
- Identifier
- doi: / 10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
- Other citation details
- Kramer, A.M., Faust, C.L., Castellanos, A.A., Fischhoff, I.R., Peel, A.J., Eby, P., Ruiz-Aravena, M., Borremans, B., Plowright, R.K., Han, B.A. (2025). Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019. NERC EDS Environmental Information Data Centre 10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
Author
Wildlife Health Ecology Research Organization
-
Borremans, B.
https://orcid.org/0000-0002-7779-4107
- GEMET - INSPIRE themes, version 1.0
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- Species Distribution
- Access constraints
- otherRestrictions Other restrictions
- Other constraints
- no limitations
- Use constraints
- otherRestrictions Other restrictions
- Use constraints
- otherRestrictions Other restrictions
- Other constraints
- If you reuse this data, you should cite: Kramer, A.M., Faust, C.L., Castellanos, A.A., Fischhoff, I.R., Peel, A.J., Eby, P., Ruiz-Aravena, M., Borremans, B., Plowright, R.K., Han, B.A. (2025). Component model iterations for inputs into a multi-scale model describing the effect of host conditions on Hendra virus shedding, eastern Australia, 2008-2019. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/93bb37c6-ef86-4386-945d-c1a3d1e2683c
- Spatial representation type
- grid Grid
- Distance
- 5000 urn:ogc:def:uom:EPSG::9001
- Metadata language
- EnglishEnglish
- Character set
- utf8 UTF8
- Topic category
-
- Biota
- Health
- Begin date
- 2008-01-01
- End date
- 2019-12-31
N
S
E
W
- Reference system identifier
- GDA2020/SA Lambert
- Distribution format
-
-
TIFF
()
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rdata
()
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TIFF
()
- OnLine resource
-
Download the data
Download a copy of this data
- OnLine resource
-
Supporting information
Supporting information available to assist in re-use of this dataset
- Hierarchy level
- dataset Dataset
- Other
- dataset
Conformance result
- Date (Publication)
- 2010-12-08
- Statement
- Each of the data objects (1,000 per component model) is related to training a component model using data sampled with replacement. These data objects are trained on field observations of host conditions (food shortage, rehabilitation admissions or formation of new roost) or locations and occupation of roost by black flying foxes (key Hendra virus host). Model parameters, predictor variables, and training are all described in the supplementary information. Each iteration only differs slightly in the training and testing data due to this resampling with replacement, allowing for slight variation in prediction among the runs.
- File identifier
- 93bb37c6-ef86-4386-945d-c1a3d1e2683c XML
- Metadata language
- EnglishEnglish
- Character set
- ISO/IEC 8859-1 (also known as Latin 1) 8859 Part 1
- Hierarchy level
- dataset Dataset
- Hierarchy level name
- dataset
- Date stamp
- 2025-06-03T07:43:20
- Metadata standard name
- UK GEMINI
- Metadata standard version
- 2.3
Point of contact
NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg
,
Lancaster
,
LA1 4AP
,
UK
https://eidc.ac.uk/
Overviews
Spatial extent
N
S
E
W
Provided by
Associated resources
Not available
NERC Data Catalogue Service