NERC Data Catalogue Service
Changes in gene expression and encapsulation in Drosophila melanogaster caused by exposure to parasitoid wasps v2
Data consists of gene expression estimates and encapsulation rates in wild caught Drosophila melanogaster larvae following exposure to different treatments. Treatments include injection with wasp homogenate, injection with oil and no injection. Also provided are functional enrichment categories for differentially expressed genes and library generation and read mapping metrics. The data were produced under the grant: NE/P00184X/1 Why does Drosophila vary in susceptibility to parasitoid wasps. Full details about this dataset can be found at
https://doi.org/10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
Simple
- Date (Publication)
- 2022-03-08
- Identifier
- doi: / 10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
- Other citation details
- Leitão, A.B., Ramesh, A., Day, J.P., Hanna, N., Devi, A., Hayes, M.P., Jiggins, F.M. (2022). Changes in gene expression and encapsulation in Drosophila melanogaster caused by exposure to parasitoid wasps v2. NERC EDS Environmental Information Data Centre 10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
- GEMET - INSPIRE themes, version 1.0
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- Habitats and Biotopes
- Access constraints
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- no limitations
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- If you reuse this data, you should cite: Leitão, A.B., Ramesh, A., Day, J.P., Hanna, N., Devi, A., Hayes, M.P., Jiggins, F.M. (2022). Changes in gene expression and encapsulation in Drosophila melanogaster caused by exposure to parasitoid wasps v2. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
- Spatial representation type
- textTable Text, table
- Metadata language
- EnglishEnglish
- Character set
- utf8 UTF8
- Topic category
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- Biota
- Begin date
- 2017-10-01
- End date
- 2017-10-31
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- Unique resource identifier
- OSGB 1936 / British National Grid
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Supporting information
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- dataset Dataset
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- dataset
Conformance result
- Date (Publication)
- 2010-12-08
- Statement
- Drosophila melanogaster larvae obtained from a wild caught population were exposed injected with wasp homogenate, oil or no manipulation was made. Encapsulation rates were measured in each case in the fly larvae. For RNA-sequencing, hemocyte and fat body tissues were isolated from third instar larvae 24 hours post experimental manipulation. RNA was isolated for sequencing. Sequenced reads were trimmed, mapped to the dm6 genome, number of reads mapping to each gene was counted, differential expression tests were applied, and functional enrichment was done.
- File identifier
- 06ea87f3-476d-40fd-acce-e6923e786d48 XML
- Metadata language
- EnglishEnglish
- Character set
- ISO/IEC 8859-1 (also known as Latin 1) 8859 Part 1
- Hierarchy level
- dataset Dataset
- Hierarchy level name
- dataset
- Date stamp
- 2025-03-21T09:36:36
- Metadata standard name
- UK GEMINI
- Metadata standard version
- 2.3
Point of contact
NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg
,
Lancaster
,
LA1 4AP
,
UK
https://eidc.ac.uk/
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