c9bc537a-d1c5-43a0-b146-42c25d4e8160 English ISO/IEC 8859-1 (also known as Latin 1) dataset dataset NERC EDS Environmental Information Data Centre Lancaster Environment Centre, Library Avenue, Bailrigg Lancaster LA1 4AP UK info@eidc.ac.uk https://eidc.ac.uk/ EIDC website The Environmental Information Data Centre (EIDC) is the UK's national data centre for terrestrial and freshwater sciences. information pointOfContact 2025-11-13T16:26:37 UK GEMINI 2.3 OSGB 1936 / British National Grid Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019 2021-09-16 publication https://catalogue.ceh.ac.uk/id/c9bc537a-d1c5-43a0-b146-42c25d4e8160 10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160 doi: Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V.C. (2021). Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019. NERC EDS Environmental Information Data Centre 10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160 This dataset contains over 4000 faecally-contaminated environmental samples collected over 2 years across 53 dairy farms in England. The samples were analysed for E. coli resistance to amoxicillin, streptomycin, cefalexin, tetracycline and ciprofloxacin and detection of resistant strains is presented in the dataset as a binary result, along with mechanisms of resistance to third generation cephalosporins where relevant. In addition there is comprehensive farm management data including antibiotic usage data. Full details about this dataset can be found at https://doi.org/10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160 Reyher, K. University of Bristol Kristen.reyher@bristol.ac.uk https://orcid.org/0000-0003-4912-5026 ORCID record ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. information author Avison, M. University of Bristol Matthewb.avison@bristol.ac.uk https://orcid.org/0000-0003-1454-8440 ORCID record ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. information author Schubert, H. University of Bristol Hannah.schubert@bristol.ac.uk author Cogan, T. University of Bristol Tristan.cogan@bristol.ac.uk author Gould, V.C. University of Bristol v.c.gould@bristol.ac.uk author NERC EDS Environmental Information Data Centre info@eidc.ac.uk custodian NERC EDS Environmental Information Data Centre info@eidc.ac.uk publisher Gould, V.C. University of Bristol v.c.gould@bristol.ac.uk pointOfContact University of Bristol EMAIL NOT PROVIDED owner Agricultural and Aquaculture Facilities theme GEMET - INSPIRE themes, version 1.0 2008-06-01 publication cattle resistance (biological) GEMET - Concepts, version 4.1.3 2019-01-28 creation Environmental risk South West England Antimicrobial resistance otherRestrictions no limitations otherRestrictions This resource is available under the terms of the Open Government Licence otherRestrictions If you reuse this data, you should cite: Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V.C. (2021). Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160 textTable English utf8 farming 2017-01-01 2018-12-31 -6.452 -1 49.864 51.766 Comma-separated values (CSV) NERC EDS Environmental Information Data Centre info@eidc.ac.uk distributor https://data-package.ceh.ac.uk/data/c9bc537a-d1c5-43a0-b146-42c25d4e8160 Download the data Download a copy of this data download https://data-package.ceh.ac.uk/sd/c9bc537a-d1c5-43a0-b146-42c25d4e8160.zip Supporting information Supporting information available to assist in re-use of this dataset information dataset dataset Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services 2010-12-08 1. Records of samples taken from 53 farms including date, type and descriptive location of sample. 2. Records of microbiological analyses of the samples to identify E. coli resistant to amoxicillin, cephalexin, tetracycline, ciprofloxacin and/or streptomycin). 3. For samples where E. coli resistant to cephalexin were detected, results of laboratory testing for resistance mechanism. 4. Questionnaires administered to farmers between Jan 2017 and Jan 2019. These collected demographic and farm management data at the start and end of the data collection periods for each farm, as well as questionnaires around choices of antibiotic administered during the data collection period at the convenience of the participants. 5. Prescription medication records acquired from veterinary practices and farm records. All calculations and data entry were checked for errors before data was accepted.