NERC Data Catalogue Service
Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019
This dataset contains over 4000 faecally-contaminated environmental samples collected over 2 years across 53 dairy farms in England. The samples were analysed for E. coli resistance to amoxicillin, streptomycin, cefalexin, tetracycline and ciprofloxacin and detection of resistant strains is presented in the dataset as a binary result, along with mechanisms of resistance to third generation cephalosporins where relevant. In addition there is comprehensive farm management data including antibiotic usage data. Full details about this dataset can be found at
https://doi.org/10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160
Simple
- Date (Publication)
- 2021-09-16
- Identifier
- doi: / 10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160
- Other citation details
- Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V. C. (2021). Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019. NERC EDS Environmental Information Data Centre 10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160
- GEMET - INSPIRE themes, version 1.0
-
- Agricultural and Aquaculture Facilities
- Access constraints
- otherRestrictions Other restrictions
- Other constraints
- no limitations
- Use constraints
- otherRestrictions Other restrictions
- Use constraints
- otherRestrictions Other restrictions
- Other constraints
- If you reuse this data, you should cite: Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V. C. (2021). Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160
- Spatial representation type
- textTable Text, table
- Metadata language
- EnglishEnglish
- Character set
- utf8 UTF8
- Topic category
-
- Farming
- Begin date
- 2017-01-01
- End date
- 2018-12-31
N
S
E
W
))
- Unique resource identifier
- OSGB 1936 / British National Grid
- Distribution format
-
-
Comma-separated values (CSV)
()
-
Comma-separated values (CSV)
()
- OnLine resource
-
Download the data
Download a copy of this data
- OnLine resource
-
Supporting information
Supporting information available to assist in re-use of this dataset
- Hierarchy level
- dataset Dataset
- Other
- dataset
Conformance result
- Date (Publication)
- 2010-12-08
- Statement
- 1. Records of samples taken from 53 farms including date, type and descriptive location of sample. 2. Records of microbiological analyses of the samples to identify E. coli resistant to amoxicillin, cephalexin, tetracycline, ciprofloxacin and/or streptomycin). 3. For samples where E. coli resistant to cephalexin were detected, results of laboratory testing for resistance mechanism. 4. Questionnaires administered to farmers between Jan 2017 and Jan 2019. These collected demographic and farm management data at the start and end of the data collection periods for each farm, as well as questionnaires around choices of antibiotic administered during the data collection period at the convenience of the participants. 5. Prescription medication records acquired from veterinary practices and farm records. All calculations and data entry were checked for errors before data was accepted.
- File identifier
- c9bc537a-d1c5-43a0-b146-42c25d4e8160 XML
- Metadata language
- EnglishEnglish
- Character set
- ISO/IEC 8859-1 (also known as Latin 1) 8859 Part 1
- Hierarchy level
- dataset Dataset
- Hierarchy level name
- dataset
- Date stamp
- 2024-02-27T16:19:31
- Metadata standard name
- UK GEMINI
- Metadata standard version
- 2.3
Point of contact
NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg
,
Lancaster
,
LA1 4AP
,
UK
https://eidc.ac.uk/
Overviews
Spatial extent
N
S
E
W
Provided by
Associated resources
Not available