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Biological specimen list of marine organisms collected from the West Antarctic Peninsula between 2017 and 2020

The ICEBERGS project aimed to understand the impact of retreating coastal glaciers upon benthic marine ecosystems along the West Antarctic Peninsula (WAP). This was a collaboration project between University of Exeter, the British Antarctic Survey, Universidad Catololica de Santiago de Concepcion and Bangor University. During three research cruises (JR17001, JR18003 and JR19002) between 2017 and 2020, biological specimens along with other scientific data and samples were collected from three coastal fjords (i.e. Marian Cove, Borgen Bay and Sheldon Cove). The biological samples were collected using mainly a benthic Agassiz trawl and some using a Hamon grab and they were either preserved in ethanol or dry.

Funding:

The funding for this grant was provided from NERC and from CONICYT Chile (NERC-CONICYT; NE/P003087/1).

Simple

Date (Creation)
2024-11-29
Date (Revision)
2024-11-29
Date (Publication)
2024-11-29
Date (released)
2024-11-29
Edition
1.0
Unique resource identifier
https://doi.org/10.5285/b024841b-2520-43f8-96c7-3abc78cd04d2
Codespace
doi
Unique resource identifier
GB/NERC/BAS/PDC/01947
Codespace
https://data.bas.ac.uk/
Unique resource identifier
NE/P003087/1
Codespace
award
Other citation details
Please cite this item as: Scourse, J., Roman Gonzalez, A., Barnes, D., Sands, C., Hollyman, P., Munoz Ramirez, C., Bascur, M., Jenkins, S., Goodall-Copestake, W., Janosik, A., Whitaker, J., Garza, T., Pienkowski, A., Zwerschke, N., Van Landeghem, K., Featherstone, A., Guzzi, A., Alexandroff, S., Butler, P., ... Trofimova, T. (2024). Biological specimen list of marine organisms collected from the West Antarctic Peninsula between 2017 and 2020 (Version 1.0) [Data set]. NERC EDS UK Polar Data Centre. https://doi.org/10.5285/b024841b-2520-43f8-96c7-3abc78cd04d2
Credit
No credit.
Status
completed Completed
Author
  University of Exeter - Scourse, James D ( Researcher )
Author
  University of Exeter - Roman Gonzalez, Alejandro ( Researcher )
Author
  British Antarctic Survey - Barnes, David ( Researcher )
Author
  British Antarctic Survey - Sands, Chester ( Researcher )
Author
  Bangor University - Hollyman, Philip ( Researcher )
Author
  Metropolitan University of Educational Sciences - Munoz Ramirez, Carlos ( Researcher )
Author
  Universitat de Barcelona - Bascur, Miguel ( Researcher )
Author
  Bangor University - Jenkins, Stuart ( Researcher )
Author
  Royal Botanic Garden Edinburgh - Goodall-Copestake, William ( Researcher )
Author
  University of West Florida - Janosik, Alexis ( Researcher )
Author
  University of Maryland, Baltimore - Whitaker, Justine ( Researcher )
Author
  University of West Florida - Garza, Tristyn ( Researcher )
Author
  Adam Mickiewicz University in Poznan - Pienkowski, Anna ( Researcher )
Author
  Gronlands Naturinstitut - Zwerschke, Nadescha ( Researcher )
Author
  Bangor University - Van Landeghem, Katrien ( Researcher )
Author
  Universite de Bretagne Occidentale - Featherstone, Amy ( Researcher )
Author
  University of Genoa - Guzzi, Alice ( Researcher )
Author
  Centre National de la Recherche Scientifique - Alexandroff, Stella ( Researcher )
Author
  University of Exeter - Butler, Paul ( Researcher )
Author
  British Antarctic Survey - Fremand, Alice ( Researcher )
Author
  University Centre in Svalbard - Furze, Mark ( Researcher )
Author
  University of Exeter - Trofimova, Tamara ( Researcher )
Point of contact
  NERC EDS UK Polar Data Centre
British Antarctic Survey, High Cross, Madingley Road , Cambridge , Cambridgeshire , CB3 0ET , United Kingdom
+44 (0)1223 221400
https://www.bas.ac.uk/team/business-teams/information-services/uk-polar-data-centre/
Maintenance and update frequency
asNeeded As needed
Maintenance note
completed Completed
Global Change Master Directory (GCMD) Science Keywords
  • EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat
  • EARTH SCIENCE > Biosphere > Ecological Dynamics > Biodiversity
  • EARTH SCIENCE > Biosphere > Zoology > Invertebrates
  • EARTH SCIENCE > Oceans > Coastal Processes > Fjords
  • EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates
Theme
  • Antarctic benthos
  • West Antarctic Peninsula
  • coastal ecosystems
  • invertebrates
Place
  • Marian Marian Cove (King George Island) Antarctica
  • Boergen Bay (Anvers Island) Antarctica
  • Sheldon Cove (Adelaide Island) Antarctica
GEMET - INSPIRE themes, version 1.0
  • Habitats and biotopes
  • Oceanographic geographical features
Access constraints
otherRestrictions Other restrictions
Other constraints
no limitations to public access
Access constraints
otherRestrictions Other restrictions
Other constraints
no limitations
Use constraints
license License
Other constraints
Open Government Licence v3.0
Use constraints
otherRestrictions Other restrictions
Other constraints
No restrictions apply.
Unique resource identifier
url
Codespace
url
Association Type
crossReference Cross reference
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url
Codespace
url
Association Type
crossReference Cross reference
Unique resource identifier
url
Codespace
url
Association Type
crossReference Cross reference
Unique resource identifier
url
Codespace
url
Association Type
crossReference Cross reference
Unique resource identifier
doi
Codespace
doi
Association Type
crossReference Cross reference
Unique resource identifier
doi
Codespace
doi
Association Type
crossReference Cross reference
Unique resource identifier
doi
Codespace
doi
Association Type
crossReference Cross reference
Unique resource identifier
doi
Codespace
doi
Association Type
crossReference Cross reference
Unique resource identifier
doi
Codespace
doi
Association Type
crossReference Cross reference
Unique resource identifier
doi
Codespace
doi
Association Type
crossReference Cross reference
Spatial representation type
textTable Text, table
Metadata language
engEnglish
Character set
utf8 UTF8
Topic category
  • Oceans
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Begin date
2017-11-21
End date
2017-12-31
Supplemental Information
It is recommended that careful attention be paid to the contents of any data, and that the author be contacted with any questions regarding appropriate use. If you find any errors or omissions, please report them to polardatacentre@bas.ac.uk.
Date (Publication)
2008-11-12
Publisher
  European Petroleum Survey Group
https://www.epsg-registry.org/
Unique resource identifier
urn:ogc:def:crs:EPSG::3031
Version
6.18.3

Distributor

Distributor
  NERC EDS UK Polar Data Centre
British Antarctic Survey, High Cross, Madingley Road , Cambridge , Cambridgeshire , CB3 0ET , United Kingdom
+44 (0)1223 221400
https://www.bas.ac.uk/team/business-teams/information-services/uk-polar-data-centre/
Name
text/csv
Units of distribution
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Transfer size
320512
OnLine resource
Get Data ( WWW:LINK-1.0-http--link )

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dataset Dataset
Statement

Methodology:

The specimens in the dataset were collected in the following research cruises: JR17001, JR18003 and JR19002.

Sampling took place in 3 locations:

Marian Cove: -62.21637 -58.80814, depth (AVE = 107m ± 5 SE)

Borgen Bay: -64.77740 -63.46647, depth (AVE = 271 m ± 27 SE)

Sheldon Cove: -67.5700 -68.2253, depth (AVE = 261 m ± 96 SE)

Samples were taken using Agassiz Trawl (AGT), Hamon Grab.

Estimated sampling effort of the AGT: Marian Cove 964.5 m2, Borgen Bay 1157.4 m2 and Sheldon Cove 1157.4 m2.

Estimated sampling effort of the Hamon Grab: Marian Cove 1.3 m3, Borgen Bay 1.6 m3 and Sheldon Cove 1.1 m3.

Agassiz trawl samples: The mini AGT has a mesh size of 1 cm and a mouth width of 1.25 m. The trawl was modified for use on the RRS James Clark Ross by adding 160 kg (bolting 4 x 40 kg cylinders between the skid plates) to enable it to be deployed using the much larger A-frame and heavier winch wire.

The deployment protocol of the mini AGT deviated slightly from the standard AGT procedure. While the AGT was lowered, the ship had to compensate for the wire lowering speed of max of 50 m/min by steaming at 0.3 knots until the AGT reached the seabed and until the full trawling wire length was put out (standard BAS AGT increases speed to 0.5 knots once the trawl hits the sea floor). The full trawling cable length used was 2 times the water depth (standard BAS AGT uses a cable length of 1.5 times water depth). The net was then trawled at 0.3 knots for 5 minutes (standard BAS AGT protocol is a trawling speed of 1 knot). Afterwards, with the ship speed kept to 0.3 knots, the AGT was hauled at 30 m/min in order to avoid damaging the gear. When the AGT had left the seafloor, the hauling speed was increased to 45 m/min. The reduced size of the trawl and reduced trawling speed results in a slightly smaller catch, that damages substantially less seafloor, but the quality of the catch is much higher.

As the trawl was raised from the water, fire hoses were used to wash most of the mud out of the net - much more efficient that sieving on the deck (Fig. 6.9.1). Once the net was clean it was held over the 1mm mesh sieve and the cod end released so the catch was caught in its entirety into the sieves where the remaining mud was carefully washed off.

Samples were sorted to class and where possible to morphotype. Most specimens were preserved in pre-chilled 99.8 percent ethanol (total vial volume at least 80 percent ethanol) and stored in the -20 degrees Celsius freezer.

Hamon Grab samples: A Hamon grab with a 20 x 40 x 40 cm bucket was used to sample the infauna present in the muddy substrate of both glacial fjords. The grab was lowered at a maximum rate of 50 m/min which was reduced to 20 m/min roughly 50 m from the seabed. The multibeam maps and shelf underwater camera system (SUCS) images were used to ensure that the grab was deployed on to soft sediment and not bedrock, the Simrad echo sounder was also used to monitor bottom depth.

Once on deck, if the grab had fully deployed, two people steadied it back onto its stand. A large plastic box was placed underneath the stand to collect the sample and the grab arm was slowly lowered by releasing the tension on the cable and pulling down on the handles at the top of the arm. This generally resulted in the full grab contents falling into the plastic box beneath the stand. If the sample did not fall out easily, small shovels and pressured seawater were used to remove it from the grab bucket.

The sample collected was equally split between two 1 mm sieves. The rationale for splitting the sample was that both frozen and ethanol preserved samples were required for different team members. Deck hoses were then used to wash the sample with seawater through the sieve; the power of the hoses was carefully monitored to make sure the infaunal animals were not damaged by high water pressure. Once...(7)

Data collection:

Agassiz Trawl (AGT), Hamon Grab, 1 mm sieves, Microsoft Excel, shelf underwater camera system (SUCS; custom made by BAS)

Data quality:

Some factors affecting the data: the samples collected were distributed among several collaborating institutions in the project. This is reflected in the ''Final Destination'' column of the dataset. The most up-to-date location of the specimens is recorded in this column. The main specimen collection was moved from University of Exeter to University of Portsmouth in 2022, which is reflected in the dataset, at which point a tally of the collection was done. This tally identified that the samples from JR18003 were missing from the collection and they are not present either at University of Exeter or University or Portsmouth and therefore are presumed to be located at BAS. Some other samples are also unaccounted for. This is all reflected in the dataset.

File identifier
b024841b-2520-43f8-96c7-3abc78cd04d2 XML
Metadata language
engEnglish
Character set
utf8 UTF8
Hierarchy level
dataset Dataset
Hierarchy level name
dataset
Date stamp
2024-11-29
Metadata standard name
ISO 19115 Geographic Information - Metadata
Metadata standard version
ISO 19115:2003(E)
Point of contact
  NERC EDS UK Polar Data Centre
British Antarctic Survey, High Cross, Madingley Road , Cambridge , Cambridgeshire , CB3 0ET , United Kingdom
+44 (0)1223 221400
https://www.bas.ac.uk/team/business-teams/information-services/uk-polar-data-centre/
 
 

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Keywords

Antarctic benthos West Antarctic Peninsula coastal ecosystems invertebrates
GEMET - INSPIRE themes, version 1.0
Habitats and biotopes Oceanographic geographical features
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > Biosphere > Aquatic Habitat > Benthic Habitat EARTH SCIENCE > Biosphere > Ecological Dynamics > Biodiversity EARTH SCIENCE > Biosphere > Zoology > Invertebrates EARTH SCIENCE > Oceans > Coastal Processes > Fjords EARTH SCIENCE > Oceans > Marine Biology > Marine Invertebrates

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