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Management data and antibiotic resistant E. coli detection in pre-weaned calves on 51 dairy farms, South West England, 2017-2018

This dataset consists of faecally-contaminated samples taken from the environment around pre-weaned calves on 51 farms in South-West England during 2017/2018 and is a subset of a larger dataset investigating antibiotic resistance in E. coli across 53 farms. The samples were analysed for presence of E. coli resistant to amoxicillin, streptomycin, cephalexin, tetracycline and/or ciprofloxacin. Management factors deemed related to pre-weaned calves are included, including antibiotic usage data at farm level. Full details about this dataset can be found at https://doi.org/10.5285/808b2b62-14db-4483-b0e6-5f533c007eec

Simple

Date (Publication)
2021-09-16
Identifier
https://catalogue.ceh.ac.uk/id/808b2b62-14db-4483-b0e6-5f533c007eec
Identifier
doi: / 10.5285/808b2b62-14db-4483-b0e6-5f533c007eec
Other citation details
Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V.C. (2021). Management data and antibiotic resistant E. coli detection in pre-weaned calves on 51 dairy farms, South West England, 2017-2018. NERC EDS Environmental Information Data Centre 10.5285/808b2b62-14db-4483-b0e6-5f533c007eec
Author
  University of Bristol - Reyher, K.
https://orcid.org/0000-0003-4912-5026
Author
  University of Bristol - Avison, M.
https://orcid.org/0000-0003-1454-8440
Author
  University of Bristol - Schubert, H.
Author
  University of Bristol - Cogan, T.
Author
  University of Bristol - Gould, V.C.
Custodian
  NERC EDS Environmental Information Data Centre
Publisher
  NERC EDS Environmental Information Data Centre
Point of contact
  University of Bristol - Gould, V.C.
Owner
  University of Bristol
GEMET - INSPIRE themes, version 1.0
  • Agricultural and Aquaculture Facilities
Access constraints
otherRestrictions Other restrictions
Other constraints
no limitations
Use constraints
otherRestrictions Other restrictions
Other constraints
This resource is available under the terms of the Open Government Licence
Use constraints
otherRestrictions Other restrictions
Other constraints
If you reuse this data, you should cite: Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V.C. (2021). Management data and antibiotic resistant E. coli detection in pre-weaned calves on 51 dairy farms, South West England, 2017-2018. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/808b2b62-14db-4483-b0e6-5f533c007eec
Spatial representation type
textTable Text, table
Metadata language
EnglishEnglish
Character set
utf8 UTF8
Topic category
  • Farming
Begin date
2017-01-01
End date
2018-12-31
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GB place names
Distribution format
  • Comma-separated values (CSV) ()

Distributor
  NERC EDS Environmental Information Data Centre
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dataset Dataset
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dataset

Conformance result

Date (Publication)
2010-12-08
Statement
This dataset is a subset of the "Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019" dataset (https://catalogue.ceh.ac.uk/documents/c9bc537a-d1c5-43a0-b146-42c25d4e8160) and comprises of 1. Records of samples taken from 51 farms including date, type, eartag numbers of animals in the immediate environment, and descriptive location of sample. 2. Results of microbiological analyses of the samples to identify E. coli resistant to amoxicillin, cephalexin, tetracycline, ciprofloxacin and/or streptomycin. 3. For samples where E. coli resistant to cephalexin were detected, results of laboratory testing for resistance mechanism. 3. For samples where E. coli resistant to cephalexin was detected, results of laboratory testing for resistance mechanism. 4. Questionnaires administered to farmers between Jan 2017 and Jan 2019. These collected demographic and farm management data at the start and end of the data collection periods for each farm, as well as questionnaires around choices of antibiotic administered during the data collection period at the convenience of the participants. 5. Prescription medication records acquired from veterinary practices and farm records. All calculations and data entry were checked for errors before data was accepted.
File identifier
808b2b62-14db-4483-b0e6-5f533c007eec XML
Metadata language
EnglishEnglish
Character set
ISO/IEC 8859-1 (also known as Latin 1) 8859 Part 1
Hierarchy level
dataset Dataset
Hierarchy level name
dataset
Date stamp
2025-11-13T16:22:54
Metadata standard name
UK GEMINI
Metadata standard version
2.3
Point of contact
  NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg , Lancaster , LA1 4AP , UK
https://eidc.ac.uk/
 
 

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GEMET - INSPIRE themes, version 1.0
Agricultural and Aquaculture Facilities

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