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Sequencing data from Signy Island, Leonie Island and Bird Island soil fungi communities, 2011

Soil fungi communities from three Antarctic islands were characterised using DNA sequencing. Between October and November 2011, soil samples were collected from Bird Island, Signy Island and Leonie Island in the sub-Antarctic, low maritime and high maritime Antarctic respectively. Soil was collected under populations of Colobanthus quitensis (Kunth) Bartl. and Deschampsia antarctica Desv., the only two native vascular plant species that occur in Antarctica. Total DNA was extracted from the soils and fungal specific primers used to amplify the ribosomal ITS region for subsequent 454 pyrosequencing. Sequences are deposited in the NCBI Sequence Read Archive (study accession SRP068654).

Funding was provided by the NERC grants NE/H014098/1, NE/H014772/1 and NE/H01408X/1.

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Date (Creation)
2017-03-08
Date (Revision)
2017-03-08
Date (Publication)
2017-03-08
Date (released)
2017-03-08
Edition
1
Unique resource identifier
70d2e5b6-3d1b-4851-ae55-4c5518ee5e29
Codespace
uuid
Unique resource identifier
GB/NERC/BAS/PDC/00927
Codespace
https://data.bas.ac.uk/
Unique resource identifier
NE/H014098/1
Codespace
award
Unique resource identifier
NE/H014772/1
Codespace
award
Unique resource identifier
NE/H01408X/1
Codespace
award
Other citation details
Please cite this item as: None
Credit
No credit.
Status
completed Completed
Author
  North Wyke Research Station - Dungait, Jennifer ( Researcher )
Author
  British Antarctic Survey - Newsham, Kevin ( Researcher )
Author
  University of Manchester - Robinson, Clare ( Researcher )
Author
  North Wyke Research Station - Bol, Roland ( Researcher )
Author
  University of Manchester - Cox, Filipa ( Researcher )
Point of contact
  NERC EDS UK Polar Data Centre
British Antarctic Survey, High Cross, Madingley Road , Cambridge , Cambridgeshire , CB3 0ET , United Kingdom
+44 (0)1223 221400
https://www.bas.ac.uk/team/business-teams/information-services/uk-polar-data-centre/
Maintenance and update frequency
asNeeded As needed
Maintenance note
completed Completed
Global Change Master Directory (GCMD) Science Keywords
  • EARTH SCIENCE > Cryosphere > Frozen Ground > Active Layer
  • EARTH SCIENCE > Cryosphere > Frozen Ground > Permafrost
  • EARTH SCIENCE > Land Surface > Soils > Microflora
  • EARTH SCIENCE > Land Surface > Soils > Permafrost
  • EARTH SCIENCE > Biosphere > Fungi Taxonomy
Theme
  • DNA
  • Fungi
  • Sequencing
  • Soil
Place
  • Signy Island, Leonie Island and Bird Island Antarctica
GEMET - INSPIRE themes, version 1.0
  • Meteorological geographical features
  • Land cover
  • Habitats and biotopes
Access constraints
otherRestrictions Other restrictions
Other constraints
no limitations to public access
Access constraints
otherRestrictions Other restrictions
Other constraints
no limitations
Use constraints
license License
Other constraints
Open Government Licence v3.0
Use constraints
otherRestrictions Other restrictions
Other constraints
This data is governed by the NERC Data Policy: https://www.ukri.org/who-we-are/nerc/our-policies-and-standards/nerc-data-policy/
Use constraints
otherRestrictions Other restrictions
Other constraints
This data is governed by the NERC data policy and supplied under Open Government Licence v.3
Use constraints
otherRestrictions Other restrictions
Other constraints
Some restrictions may apply - see details on NCBI website.
Unique resource identifier
url
Codespace
url
Association Type
crossReference Cross reference
Unique resource identifier
url
Codespace
url
Association Type
crossReference Cross reference
Spatial representation type
textTable Text, table
Metadata language
engEnglish
Character set
utf8 UTF8
Topic category
  • Biota
  • Geoscientific information
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Begin date
2011-10-01
End date
2011-11-30
Supplemental Information
It is recommended that careful attention be paid to the contents of any data, and that the author be contacted with any questions regarding appropriate use. If you find any errors or omissions, please report them to polardatacentre@bas.ac.uk.
Date (Publication)
2008-11-12
Publisher
  European Petroleum Survey Group
https://www.epsg-registry.org/
Unique resource identifier
urn:ogc:def:crs:EPSG::3031
Version
6.18.3

Distributor

Distributor
  NERC EDS UK Polar Data Centre
British Antarctic Survey, High Cross, Madingley Road , Cambridge , Cambridgeshire , CB3 0ET , United Kingdom
+44 (0)1223 221400
https://www.bas.ac.uk/team/business-teams/information-services/uk-polar-data-centre/
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bytes
Transfer size
1
OnLine resource
Get Data ( WWW:LINK-1.0-http--link )

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See the referenced publication for further information.

File identifier
70d2e5b6-3d1b-4851-ae55-4c5518ee5e29 XML
Metadata language
engEnglish
Character set
utf8 UTF8
Hierarchy level
dataset Dataset
Hierarchy level name
dataset
Date stamp
2017-03-08
Metadata standard name
ISO 19115 Geographic Information - Metadata
Metadata standard version
ISO 19115:2003(E)
Point of contact
  NERC EDS UK Polar Data Centre
British Antarctic Survey, High Cross, Madingley Road , Cambridge , Cambridgeshire , CB3 0ET , United Kingdom
+44 (0)1223 221400
https://www.bas.ac.uk/team/business-teams/information-services/uk-polar-data-centre/
 
 

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Keywords

DNA Fungi Sequencing Soil
GEMET - INSPIRE themes, version 1.0
Habitats and biotopes Land cover Meteorological geographical features
Global Change Master Directory (GCMD) Science Keywords
EARTH SCIENCE > Biosphere > Fungi Taxonomy EARTH SCIENCE > Cryosphere > Frozen Ground > Active Layer EARTH SCIENCE > Cryosphere > Frozen Ground > Permafrost EARTH SCIENCE > Land Surface > Soils > Microflora EARTH SCIENCE > Land Surface > Soils > Permafrost

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