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Phenotypic traits of Rhizobium leguminosarum TRX19 clones evolved in the presence of different lytic bacteriophages

This dataset comprises phenotypic data of Rhizobium leguminosarum TRX19 clones evolved in the presence or absence of lytic phages. The clones assayed were isolated from populations of R. leguminosarum which had been evolved in lab media for twenty 73hr 'transfers'. Clones were assessed for their resistance to the ancestral phages (reduction in bacterial growth), their ability to form symbioses (plant biomass, nitrogen content and nodule counts) and traits associated with colonisation (biofilm production, swimming and swarming motility and gelatinase activity). This experiment tests the hypothesis that evolution for phage resistance will drive the loss of symbiosis functions in rhizobia due to antagonistic pleiotropy.

Simple

Date (Publication)
2026-03-04
Date (Creation)
2025-09-04
Identifier
https://catalogue.ceh.ac.uk/id/12f2f235-8e18-40c7-9113-acb85de9edd7
Point of contact
  University of Sheffield - Ellie Harrison
Author
  University of Sheffield - Pain, C.
Author
  University of Sheffield - Harrison, E.
https://orcid.org/0000-0002-2050-4631
Owner
  University of Sheffield
Custodian
  NERC EDS Environmental Information Data Centre
Publisher
  NERC EDS Environmental Information Data Centre
GEMET - Concepts, version 4.1.3
  • symbiosis
Keywords
  • Evolutionary ecology
  • Bacteriophage
  • Rhizobia
  • Antagonistic coevolution
Access constraints
otherRestrictions Other restrictions
Other constraints
no limitations
Use constraints
otherRestrictions Other restrictions
Other constraints
This resource is available under the terms of the Open Government Licence
Metadata language
EnglishEnglish
Character set
utf8 UTF8
Topic category
  • Environment
Distribution format
  • Comma-separated values (CSV) ()

Distributor
  NERC EDS Environmental Information Data Centre
Hierarchy level
nonGeographicDataset Non geographic dataset
Other
nonGeographicDataset

Conformance result

Date (Publication)
2010-12-08
Statement
This dataset contains assay data from an evolution experiment assessing the impact of evolution with different lytic phages on the symbiotic performance of rhizobia. Briefly, strain Rhizobium leguminosarum TRX19 was evolved in lab media with 1 of 3 phages or in the absence of phage. Clones were isolated from evolved populations and screened for resistance, symbiotic function and phenotypes related to colonisation. Most of the data are raw values acquired from assays of the evolved clones. These include: growth with host plant - collecting plant biomass, nodule counts and nitrogen content via Isotope ratio mass spectrometry. Phenotypic analysis - biofilm production, swimming and swarming motility, growth rate in liquid broth and gelatinase assays Phage resistance data is presented as RBG - reduction in bacterial growth - generated as the ratio of the density (OD600) of cultures grown in a microtitre plate either with or without phages. The ratio of phage exposed to phage free bacterial growth indicates the severity of the infection.
File identifier
12f2f235-8e18-40c7-9113-acb85de9edd7 XML
Metadata language
EnglishEnglish
Character set
ISO/IEC 8859-1 (also known as Latin 1) 8859 Part 1
Hierarchy level
nonGeographicDataset Non geographic dataset
Hierarchy level name
nonGeographicDataset
Date stamp
2026-03-04T09:03:49
Metadata standard name
UK GEMINI
Metadata standard version
2.3
Point of contact
  NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg , Lancaster , LA1 4AP , UK
https://eidc.ac.uk/
 
 

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