Changes in gene expression and encapsulation in Drosophila melanogaster caused by exposure to parasitoid wasps v2

Data consists of gene expression estimates and encapsulation rates in wild caught Drosophila melanogaster larvae following exposure to different treatments. Treatments include injection with wasp homogenate, injection with oil and no injection. Also provided are functional enrichment categories for differentially expressed genes and library generation and read mapping metrics. The data were produced under the grant: NE/P00184X/1 Why does Drosophila vary in susceptibility to parasitoid wasps. Full details about this dataset can be found at https://doi.org/10.5285/06ea87f3-476d-40fd-acce-e6923e786d48

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Identification info

Metadata Language
English (en)
Character set
utf8
Dataset Reference Date ()
2022-03-08
Identifier
https://catalogue.ceh.ac.uk/id/06ea87f3-476d-40fd-acce-e6923e786d48
Identifier
doi: / 10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
Other citation details
Leitão, A.B., Ramesh, A., Day, J.P., Hanna, N., Devi, A., Hayes, M.P., Jiggins, F.M. (2022). Changes in gene expression and encapsulation in Drosophila melanogaster caused by exposure to parasitoid wasps v2. NERC EDS Environmental Information Data Centre 10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
  University of Cambridge - Leitão, A.B.
https://orcid.org/0000-0001-9004-1831
  University of Cambridge - Ramesh, A.
https://orcid.org/0000-0003-0050-3516
  University of Cambridge - Day, J.P.
  University of Cambridge - Hanna, N.
  University of Cambridge - Devi, A.
  University of Cambridge - Hayes, M.P.
  University of Cambridge - Jiggins, F.M.
https://orcid.org/0000-0001-7470-8157
  NERC EDS Environmental Information Data Centre
  University of Cambridge - Ramesh, A.
https://orcid.org/0000-0003-0050-3516
  NERC EDS Environmental Information Data Centre
  University of Cambridge
GEMET - INSPIRE themes, version 1.0 ()
  • Habitats and Biotopes
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no limitations
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This resource is available under the terms of the Open Government Licence
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If you reuse this data, you should cite: Leitão, A.B., Ramesh, A., Day, J.P., Hanna, N., Devi, A., Hayes, M.P., Jiggins, F.M. (2022). Changes in gene expression and encapsulation in Drosophila melanogaster caused by exposure to parasitoid wasps v2. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/06ea87f3-476d-40fd-acce-e6923e786d48
Spatial representation type
textTable
Topic category
  • Biota
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W


Begin date
2017-10-01
End date
2017-10-31
 
Code
OSGB 1936 / British National Grid

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  • txt ()

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dataset
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dataset

Report

Dataset Reference Date ()
2010-12-08
Statement
Drosophila melanogaster larvae obtained from a wild caught population were exposed injected with wasp homogenate, oil or no manipulation was made. Encapsulation rates were measured in each case in the fly larvae. For RNA-sequencing, hemocyte and fat body tissues were isolated from third instar larvae 24 hours post experimental manipulation. RNA was isolated for sequencing. Sequenced reads were trimmed, mapped to the dm6 genome, number of reads mapping to each gene was counted, differential expression tests were applied, and functional enrichment was done.

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File identifier
06ea87f3-476d-40fd-acce-e6923e786d48 XML
Metadata Language
English (en)
Character set
ISO/IEC 8859-1 (also known as Latin 1)
Resource type
dataset
Hierarchy level name
dataset
Metadata Date
2024-02-27T16:20:20
Metadata standard name
UK GEMINI
Metadata standard version
2.3
  NERC EDS Environmental Information Data Centre
Lancaster Environment Centre, Library Avenue, Bailrigg , Lancaster , LA1 4AP , UK
https://eidc.ac.uk/
 
 

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