0239cdaf-deab-4151-8f68-715063eaea45 English ISO/IEC 8859-1 (also known as Latin 1) dataset dataset NERC EDS Environmental Information Data Centre Lancaster Environment Centre, Library Avenue, Bailrigg Lancaster LA1 4AP UK info@eidc.ac.uk https://eidc.ac.uk/ EIDC website The Environmental Information Data Centre (EIDC) is the UK's national data centre for terrestrial and freshwater sciences. information pointOfContact 2025-11-13T16:23:23 UK GEMINI 2.3 WGS 84 Antibiotic resistance and resistant genes in Escherichia coli from human, poultry and environmental samples in urban and rural Bangladesh (2017-18) 2019-02-08 publication https://catalogue.ceh.ac.uk/id/0239cdaf-deab-4151-8f68-715063eaea45 10.5285/0239cdaf-deab-4151-8f68-715063eaea45 doi: Rousham, E.K., Islam, M.A., Unicomb, L., Asaduzzaman, M., Islam, R., Amin, B., Mozmader, T.I.M.A., Hossain, M.I., Rahman, M., Wood, P.J. (2019). Antibiotic resistance and resistant genes in Escherichia coli from human, poultry and environmental samples in urban and rural Bangladesh (2017-18). NERC Environmental Information Data Centre 10.5285/0239cdaf-deab-4151-8f68-715063eaea45 The dataset includes information on antibiotic-resistance and resistance genes in bacteria (Escherichia coli) from humans, poultry and the environment in rural households, poultry farms and urban food markets. The rural households and poultry farms (broiler chickens) were located in Mirzapur, Tangail district; and urban food markets were located in Dhaka city, Bangladesh. Environmental samples were collected from surface water, water supply, wastewater, soil, animal faeces (poultry and cattle) and solid waste between February 2017 and October 2018 . DNA samples from antibiotic-resistant bacteria found in all samples were analysed for quantitative assessment of two resistance genes. Trained staff from the International Centre for Diarrhoeal Disease Research, Bangladesh (icddr,b) undertook sample collection and laboratory analysis. The aim of the study was to assess the prevalence and abundance of antibiotic-resistant bacteria and associated genes among humans, poultry and environmental compartments in Bangladesh. The survey was part of a wider research project, Spatial and Temporal Dynamics of Antimicrobial Resistance Transmission from the Outdoor Environment to Humans in Urban and Rural Bangladesh. The research was funded by NERC/BBSRC/MRC on behalf of the Antimicrobial Resistance Cross-Council Initiative award NE/N019555/1. Full details about this dataset can be found at https://doi.org/10.5285/0239cdaf-deab-4151-8f68-715063eaea45 NERC EDS Environmental Information Data Centre info@eidc.ac.uk custodian NERC Environmental Information Data Centre info@eidc.ac.uk publisher Rousham, E.K. Loughborough University E.K.Rousham@lboro.ac.uk https://orcid.org/0000-0001-5654-9279 ORCID record ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. information author Islam, M.A. International Centre for Diarrhoeal Disease Research, Bangladesh maislam@icddrb.org https://orcid.org/0000-0001-5107-5289 ORCID record ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. information author Unicomb, L. International Centre for Diarrhoeal Disease Research, Bangladesh leanne@icddrb.org author Asaduzzaman, M. International Centre for Diarrhoeal Disease Research, Bangladesh asaduzzaman@icddrb.org https://orcid.org/0000-0001-9048-7980 ORCID record ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. information author Islam, R. International Centre for Diarrhoeal Disease Research, Bangladesh rayhanul.islam@icddrb.org author Amin, B. International Centre for Diarrhoeal Disease Research, Bangladesh badrul.amin@icddrb.org author Mozmader, T.I.M.A. International Centre for Diarrhoeal Disease Research, Bangladesh amin.uddin@icddrb.org author Hossain, M.I. International Centre for Diarrhoeal Disease Research, Bangladesh iqbal.hossain@icddrb.org author Rahman, M. International Centre for Diarrhoeal Disease Research, Bangladesh mahdia@icddrb.org author Wood, P.J. Loughborough University p.j.wood@lboro.ac.uk author Rousham, E.K. Loughborough University E.K.Rousham@lboro.ac.uk https://orcid.org/0000-0001-5654-9279 ORCID record ORCID is an open, non-profit, community-driven effort to create and maintain a registry of unique researcher identifiers and a transparent method of linking research activities and outputs to these identifiers. information pointOfContact notPlanned microbiology DNA antibiotic resistance (biological) infectious disease bacterium GEMET - Concepts, version 4.1.3 2019-01-28 creation tangail Dhaka Bangladesh GeoNames 2006-01-01 creation bacterial counts antimicrobial resistance carbapenem third-generation cephalosporin otherRestrictions no limitations otherRestrictions This resource is made available under the terms of the Open Government Licence otherRestrictions © Loughborough University otherRestrictions © International Centre for Diarrhoeal Disease Research, Bangladesh otherRestrictions If you reuse this data, you should cite: Rousham, E.K., Islam, M.A., Unicomb, L., Asaduzzaman, M., Islam, R., Amin, B., Mozmader, T.I.M.A., Hossain, M.I., Rahman, M., Wood, P.J. (2019). Antibiotic resistance and resistant genes in Escherichia coli from human, poultry and environmental samples in urban and rural Bangladesh (2017-18). NERC Environmental Information Data Centre https://doi.org/10.5285/0239cdaf-deab-4151-8f68-715063eaea45 textTable 1 English utf8 health 2017-02-01 2018-10-31 89.819 91.082 23.282 24.847 Comma-separated values (CSV) NERC EDS Environmental Information Data Centre info@eidc.ac.uk distributor https://data-package.ceh.ac.uk/data/0239cdaf-deab-4151-8f68-715063eaea45 Download the data Download a copy of this data download https://data-package.ceh.ac.uk/sd/0239cdaf-deab-4151-8f68-715063eaea45.zip Supporting information Supporting information available to assist in re-use of this dataset information dataset dataset Commission Regulation (EU) No 1089/2010 of 23 November 2010 implementing Directive 2007/2/EC of the European Parliament and of the Council as regards interoperability of spatial data sets and services 2010-12-08 Samples were collected in the field and transported to the International Centre for Diarrhoeal Disease Research, Bangladesh to undergo laboratory analysis and storage. Field measurements and laboratory results were recorded on paper-based forms or generated from automated readings, entered into Excel then converted to .csv files for ingestion into the Environmental Information Data Centre.